Transcript: ENST00000628229.1 PADI4-210

Description

peptidyl arginine deiminase 4 [Source:HGNC Symbol;Acc:HGNC:18368]

Gene Synonyms

PAD, PADI5, PDI4, PDI5

Location

Scaffold HG2095_PATCH: 153,421-209,227 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 38 domains and features, is associated with 25726 variant alleles and maps to 527 oligo probes.

Gene

This transcript is a product of gene ENSG00000280908.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000628229.1	PADI4-210	2267	663aa	ENSP00000487021.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9UM07	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000626048.2	PADI4-206	841	127aa	ENSP00000486726.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B1AQ67	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000627887.2	PADI4-208	513	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000627140.1	PADI4-207	471	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000628035.1	PADI4-209	373	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 2,267 bps, Translation length: 663 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UM07

Version

ENST00000628229.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article. This was projected to the alternate locus via a mapping from the primary assembly.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENST00000628229.1 PADI4-210

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Transcript: ENST00000628229.1 PADI4-210

Summary

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