Transcript: ENST00000626663.3 SURF1-210

Description

SURF1 cytochrome c oxidase assembly factor [Source:HGNC Symbol;Acc:HGNC:11474]

Gene Synonyms

SHY1

Location

Scaffold HG2030_PATCH: 177,852-182,581 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 16 domains and features, is associated with 3902 variant alleles and maps to 459 oligo probes.

Gene

This transcript is a product of gene ENSG00000280627.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000626663.3	SURF1-210	1092	300aa	ENSP00000487158.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q15526-1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000628258.2	SURF1-211	991	191aa	ENSP00000486289.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A087WYS9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000630619.2	SURF1-213	931	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000629007.1	SURF1-212	493	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000625378.1	SURF1-209	813	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,092 bps, Translation length: 300 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q15526

Version

ENST00000626663.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENST00000626663.3 SURF1-210

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Transcript: ENST00000626663.3 SURF1-210

Summary

About Us

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