Transcript: ENST00000625702.1 LINC01127-201

Description

long intergenic non-protein coding RNA 1127 [Source:HGNC Symbol;Acc:HGNC:49292]

Location

Chromosome 2: 101,983,465-101,985,105 forward strand.

About this transcript

This transcript has 3 exons and maps to 143 oligo probes.

Gene

This transcript is a product of gene ENSG00000281162.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000723061.1	LINC01127-210	513	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000627215.2	LINC01127-202	3749	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000723063.1	LINC01127-212	2849	No protein	-	lncRNA	-	-
ENST00000702898.2	LINC01127-209	1026	No protein	-	lncRNA	-	-
ENST00000723077.1	LINC01127-226	1024	No protein	-	lncRNA	-	-
ENST00000628502.3	LINC01127-205	1015	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000627273.3	LINC01127-203	904	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000723066.1	LINC01127-215	828	No protein	-	lncRNA	-	-
ENST00000702641.2	LINC01127-208	815	No protein	-	lncRNA	-	-
ENST00000625702.1	LINC01127-201	766	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000702456.2	LINC01127-207	720	No protein	-	lncRNA	-	-
ENST00000723078.1	LINC01127-227	663	No protein	-	lncRNA	-	-
ENST00000627337.1	LINC01127-204	590	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000723064.1	LINC01127-213	566	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000723073.1	LINC01127-222	516	No protein	-	lncRNA	-	-
ENST00000723062.1	LINC01127-211	492	No protein	-	lncRNA	-	-
ENST00000723072.1	LINC01127-221	492	No protein	-	lncRNA	-	-
ENST00000692650.2	LINC01127-206	479	No protein	-	lncRNA	-	-
ENST00000723068.1	LINC01127-217	455	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000723074.1	LINC01127-223	448	No protein	-	lncRNA	-	-
ENST00000723065.1	LINC01127-214	430	No protein	-	lncRNA	-	-
ENST00000723067.1	LINC01127-216	380	No protein	-	lncRNA	-	-
ENST00000723071.1	LINC01127-220	358	No protein	-	lncRNA	-	-
ENST00000723069.1	LINC01127-218	352	No protein	-	lncRNA	-	-
ENST00000723075.1	LINC01127-224	335	No protein	-	lncRNA	-	-
ENST00000723070.1	LINC01127-219	329	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000723076.1	LINC01127-225	280	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 766 bps,

Transcript Support Level (TSL)

TSL:4

Version

ENST00000625702.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000625702.1 LINC01127-201

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Transcript: ENST00000625702.1 LINC01127-201

Summary

About Us

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