Transcript: ENST00000624527.3 LINC01600-201

Description

long intergenic non-protein coding RNA 1600 [Source:HGNC Symbol;Acc:HGNC:21600]

Gene Synonyms

BA145H9.2, C6ORF195, FLJ31934

Location

About this transcript

This transcript has 3 exons, is associated with 5125 variant alleles and maps to 227 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000692706.2	LINC01600-205	2267	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENST00000666762.1	LINC01600-203	2557	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000624527.3	LINC01600-201	2450	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000670876.1	LINC01600-204	2276	No protein	-	lncRNA	-	-
ENST00000653895.1	LINC01600-202	649	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 2,450 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000624527.3

Type

LncRNA

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana (TAGENE) manual annotation have the same sequence, for every base pair. See article.