Human (GRCh38.p14)
Description

cadherin related family member 1 [Source:HGNC Symbol;Acc:HGNC:14550]

Gene Synonyms

CORD15, KIAA1775, PCDH21, RP65

Location
About this transcript

This transcript has 17 exons, is annotated with 54 domains and features, is associated with 11967 variant alleles and maps to 701 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000623527.4CDHR1-2066877859aaENSP00000485478.1
 
Protein coding
CCDS7372Q96JP9-1 NM_033100.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P2TSL:1
ENST00000372117.6CDHR1-2024537598aaENSP00000361189.4
 
Protein coding
A0A0A6YYA3 -TSL:2CDS 5' incomplete
ENST00000332904.7CDHR1-2012694745aaENSP00000331063.3
 
Protein coding
CCDS53548Q96JP9-2 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000623399.1CDHR1-20550378aaENSP00000485245.1
 
Protein coding
A0A096LNV6 -TSL:3CDS 5' incomplete
ENST00000622973.1CDHR1-204700135aaENSP00000485151.1
 
Nonsense mediated decay
A0A096LNP9 -TSL:5CDS 5' incomplete
ENST00000624091.1CDHR1-20758748aaENSP00000485460.1
 
Nonsense mediated decay
A0A096LP91 -TSL:5CDS 5' incomplete
ENST00000459673.1CDHR1-2033757No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 17, Coding exons: 17, Transcript length: 6,877 bps, Translation length: 859 residues

MANE

This MANE Select transcript contains ENSP00000485478 and matches to NM_033100.4 and NP_149091.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96JP9

CCDS

This transcript is a member of the Human CCDS set: CCDS7372

Transcript Support Level (TSL)

TSL:1

Version

ENST00000623527.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.