Transcript: ENST00000622300.1 PRPF31-234

Description

pre-mRNA processing factor 31 [Source:HGNC Symbol;Acc:HGNC:15446]

Gene Synonyms

HPRP31, NY-BR-99, PRP31, RP11, SNRNP61

Location

Scaffold HSCHR19LRC_LRC_T_CTG3_1: 89,903-106,263 forward strand.

About this transcript

This transcript has 14 exons, is annotated with 52 domains and features, is associated with 8422 variant alleles and maps to 561 oligo probes.

Gene

This transcript is a product of gene ENSG00000277953.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000622300.1	PRPF31-234	2183	499aa	ENSP00000481654.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000619220.4	PRPF31-233	2269	491aa	ENSP00000484834.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 14, Coding exons: 13, Transcript length: 2,183 bps, Translation length: 499 residues

Transcript Support Level (TSL)

TSL:1

Version

ENST00000622300.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENST00000622300.1 PRPF31-234

Summary

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Transcript: ENST00000622300.1 PRPF31-234

Summary

About Us

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