Transcript: ENST00000622121.1 PDC-AS1-202

Description

PDC antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40432]

Location

Chromosome 1: 186,435,161-186,470,291 forward strand.

About this transcript

This transcript has 5 exons, is associated with 14550 variant alleles and maps to 16 oligo probes.

Gene

This transcript is a product of gene ENSG00000229739.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000655945.1	PDC-AS1-203	2156	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000660380.1	PDC-AS1-205	3277	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000665030.1	PDC-AS1-208	2628	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000662990.1	PDC-AS1-207	1205	No protein	-	lncRNA	-	-
ENST00000660991.1	PDC-AS1-206	1047	No protein	-	lncRNA	-	-
ENST00000657692.1	PDC-AS1-204	894	No protein	-	lncRNA	-	-
ENST00000622121.1	PDC-AS1-202	542	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000429768.1	PDC-AS1-201	314	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 542 bps,

Transcript Support Level (TSL)

TSL:4

Version

ENST00000622121.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000622121.1 PDC-AS1-202

Summary

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Transcript: ENST00000622121.1 PDC-AS1-202

Summary

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