Transcript: ENST00000619217.1 CDC42EP5-212

Description

CDC42 effector protein 5 [Source:HGNC Symbol;Acc:HGNC:17408]

Gene Synonyms

BORG3, CEP5

Location

Scaffold HSCHR19_4_CTG3_1: 447,324-455,525 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 12 domains and features, is associated with 4597 variant alleles and maps to 264 oligo probes.

Gene

This transcript is a product of gene ENSG00000278444.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000619217.1	CDC42EP5-212	864	148aa	ENSP00000479726.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6NZY7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000620390.1	CDC42EP5-213	288	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 864 bps, Translation length: 148 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6NZY7

Transcript Support Level (TSL)

TSL:1

Version

ENST00000619217.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENST00000619217.1 CDC42EP5-212

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Transcript: ENST00000619217.1 CDC42EP5-212

Summary

About Us

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