Transcript: ENST00000618037.1 LINC01545-202

Description

long intergenic non-protein coding RNA 1545 [Source:HGNC Symbol;Acc:HGNC:17986]

Gene Synonyms

CXORF31, OTTHUMG00000021429

Location

Chromosome X: 46,887,421-46,894,592 reverse strand.

About this transcript

This transcript has 3 exons and maps to 129 oligo probes.

Gene

This transcript is a product of gene ENSG00000204904.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000377879.8	LINC01545-201	1155	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000776857.1	LINC01545-210	1309	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000776853.1	LINC01545-206	1295	No protein	-	lncRNA	-	-
ENST00000776852.1	LINC01545-205	1204	No protein	-	lncRNA	-	-
ENST00000776855.1	LINC01545-208	1013	No protein	-	lncRNA	-	-
ENST00000776854.1	LINC01545-207	893	No protein	-	lncRNA	-	-
ENST00000776850.1	LINC01545-203	562	No protein	-	lncRNA	-	-
ENST00000776859.1	LINC01545-212	521	No protein	-	lncRNA	-	-
ENST00000776856.1	LINC01545-209	505	No protein	-	lncRNA	-	-
ENST00000776851.1	LINC01545-204	477	No protein	-	lncRNA	-	-
ENST00000776858.1	LINC01545-211	476	No protein	-	lncRNA	-	-
ENST00000618037.1	LINC01545-202	428	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 428 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENST00000618037.1

Type

LncRNA

Annotation Method

Long intergenic non-coding RNAs (lincRNAs) were annotated by the Ensembl lincRNA annotation pipeline.

Transcript: ENST00000618037.1 LINC01545-202

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Transcript: ENST00000618037.1 LINC01545-202

Summary

About Us

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