Transcript: ENST00000616425.2 C17orf78-201

Description

chromosome 17 open reading frame 78 [Source:HGNC Symbol;Acc:HGNC:26831]

Gene Synonyms

FLJ39647

Location

Scaffold HSCHR17_7_CTG4: 1,612,050-1,628,727 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 9 domains and features and maps to 261 oligo probes.

Gene

This transcript is a product of gene ENSG00000278145.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000616425.2	C17orf78-201	1862	275aa	ENSP00000484072.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8N4C9-1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000631822.1	C17orf78-202	1675	159aa	ENSP00000488505.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8N4C9-2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,862 bps, Translation length: 275 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N4C9

Transcript Support Level (TSL)

TSL:1

Version

ENST00000616425.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000616425.2 C17orf78-201

Summary

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Transcript: ENST00000616425.2 C17orf78-201

Summary

About Us

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