Transcript: ENST00000616043.1 LINC02614-216

Description

long intergenic non-protein coding RNA 2614 [Source:HGNC Symbol;Acc:HGNC:54072]

Location

Chromosome 3: 125,862,881-125,866,202 reverse strand.

About this transcript

This transcript has 2 exons and maps to 104 oligo probes.

Gene

This transcript is a product of gene ENSG00000241288.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000614795.1	LINC02614-215	670	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000773928.1	LINC02614-227	789	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000774172.1	LINC02614-293	2034	No protein	-	lncRNA	-	-
ENST00000468859.1	LINC02614-201	1996	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000774146.1	LINC02614-267	1852	No protein	-	lncRNA	-	-
ENST00000773956.1	LINC02614-255	1517	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000774181.1	LINC02614-302	1358	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000774171.1	LINC02614-292	1307	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000657594.1	LINC02614-225	1256	No protein	-	lncRNA	-	-
ENST00000774175.1	LINC02614-296	1255	No protein	-	lncRNA	-	-
ENST00000774174.1	LINC02614-295	1254	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000774180.1	LINC02614-301	1245	No protein	-	lncRNA	-	-
ENST00000774182.1	LINC02614-303	1219	No protein	-	lncRNA	-	-
ENST00000773932.1	LINC02614-231	1153	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000774184.1	LINC02614-305	1149	No protein	-	lncRNA	-	-
ENST00000774168.1	LINC02614-289	1133	No protein	-	lncRNA	-	-
ENST00000774178.1	LINC02614-299	1130	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000773952.1	LINC02614-251	1129	No protein	-	lncRNA	-	-
ENST00000774183.1	LINC02614-304	1124	No protein	-	lncRNA	-	-
ENST00000774161.1	LINC02614-282	1101	No protein	-	lncRNA	-	-
ENST00000774173.1	LINC02614-294	1096	No protein	-	lncRNA	-	-
ENST00000773933.1	LINC02614-232	1073	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000774170.1	LINC02614-291	1006	No protein	-	lncRNA	-	-
ENST00000773943.1	LINC02614-242	991	No protein	-	lncRNA	-	-
ENST00000774185.1	LINC02614-306	984	No protein	-	lncRNA	-	-
ENST00000773931.1	LINC02614-230	983	No protein	-	lncRNA	-	-
ENST00000650374.1	LINC02614-224	981	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000773947.1	LINC02614-246	970	No protein	-	lncRNA	-	-
ENST00000774141.1	LINC02614-262	968	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000628476.1	LINC02614-223	965	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000773953.1	LINC02614-252	929	No protein	-	lncRNA	-	-
ENST00000773946.1	LINC02614-245	928	No protein	-	lncRNA	-	-
ENST00000774157.1	LINC02614-278	925	No protein	-	lncRNA	-	-
ENST00000609352.5	LINC02614-212	903	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000774140.1	LINC02614-261	895	No protein	-	lncRNA	-	-
ENST00000774148.1	LINC02614-269	893	No protein	-	lncRNA	-	-
ENST00000774177.1	LINC02614-298	892	No protein	-	lncRNA	-	-
ENST00000773934.1	LINC02614-233	888	No protein	-	lncRNA	-	-
ENST00000773949.1	LINC02614-248	878	No protein	-	lncRNA	-	-
ENST00000773929.1	LINC02614-228	876	No protein	-	lncRNA	-	-
ENST00000774156.1	LINC02614-277	872	No protein	-	lncRNA	-	-
ENST00000774144.1	LINC02614-265	868	No protein	-	lncRNA	-	-
ENST00000773944.1	LINC02614-243	866	No protein	-	lncRNA	-	-
ENST00000774142.1	LINC02614-263	851	No protein	-	lncRNA	-	-
ENST00000625484.1	LINC02614-219	846	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000774159.1	LINC02614-280	846	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000774176.1	LINC02614-297	840	No protein	-	lncRNA	-	-
ENST00000774135.1	LINC02614-256	828	No protein	-	lncRNA	-	-
ENST00000608488.1	LINC02614-210	822	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000774143.1	LINC02614-264	820	No protein	-	lncRNA	-	-
ENST00000774187.1	LINC02614-308	820	No protein	-	lncRNA	-	-
ENST00000773930.1	LINC02614-229	814	No protein	-	lncRNA	-	-
ENST00000600712.5	LINC02614-208	800	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000774145.1	LINC02614-266	793	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000774155.1	LINC02614-276	789	No protein	-	lncRNA	-	-
ENST00000773936.1	LINC02614-235	785	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000774164.1	LINC02614-285	779	No protein	-	lncRNA	-	-
ENST00000774152.1	LINC02614-273	758	No protein	-	lncRNA	-	-
ENST00000664857.2	LINC02614-226	753	No protein	-	lncRNA	-	-
ENST00000628013.2	LINC02614-222	753	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000773948.1	LINC02614-247	750	No protein	-	lncRNA	-	-
ENST00000774153.1	LINC02614-274	746	No protein	-	lncRNA	-	-
ENST00000774188.1	LINC02614-309	743	No protein	-	lncRNA	-	-
ENST00000773940.1	LINC02614-239	737	No protein	-	lncRNA	-	-
ENST00000597749.2	LINC02614-204	723	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000599176.5	LINC02614-205	713	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000774166.1	LINC02614-287	712	No protein	-	lncRNA	-	-
ENST00000774147.1	LINC02614-268	709	No protein	-	lncRNA	-	-
ENST00000774151.1	LINC02614-272	707	No protein	-	lncRNA	-	-
ENST00000774167.1	LINC02614-288	698	No protein	-	lncRNA	-	-
ENST00000773941.1	LINC02614-240	688	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000599350.5	LINC02614-206	686	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000626334.1	LINC02614-221	685	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000773935.1	LINC02614-234	685	No protein	-	lncRNA	-	-
ENST00000600280.1	LINC02614-207	683	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000774186.1	LINC02614-307	674	No protein	-	lncRNA	-	-
ENST00000774160.1	LINC02614-281	668	No protein	-	lncRNA	-	-
ENST00000614540.4	LINC02614-214	634	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000774138.1	LINC02614-259	624	No protein	-	lncRNA	-	-
ENST00000601985.5	LINC02614-209	614	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000774137.1	LINC02614-258	603	No protein	-	lncRNA	-	-
ENST00000774162.1	LINC02614-283	598	No protein	-	lncRNA	-	-
ENST00000774150.1	LINC02614-271	574	No protein	-	lncRNA	-	-
ENST00000626312.1	LINC02614-220	568	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000774149.1	LINC02614-270	566	No protein	-	lncRNA	-	-
ENST00000773945.1	LINC02614-244	558	No protein	-	lncRNA	-	-
ENST00000614362.1	LINC02614-213	540	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000773951.1	LINC02614-250	534	No protein	-	lncRNA	-	-
ENST00000774139.1	LINC02614-260	532	No protein	-	lncRNA	-	-
ENST00000774158.1	LINC02614-279	503	No protein	-	lncRNA	-	-
ENST00000594843.1	LINC02614-203	502	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000773950.1	LINC02614-249	502	No protein	-	lncRNA	-	-
ENST00000774165.1	LINC02614-286	495	No protein	-	lncRNA	-	-
ENST00000774136.1	LINC02614-257	485	No protein	-	lncRNA	-	-
ENST00000773937.1	LINC02614-236	477	No protein	-	lncRNA	-	-
ENST00000774163.1	LINC02614-284	474	No protein	-	lncRNA	-	-
ENST00000773939.1	LINC02614-238	468	No protein	-	lncRNA	-	-
ENST00000774154.1	LINC02614-275	457	No protein	-	lncRNA	-	-
ENST00000774169.1	LINC02614-290	451	No protein	-	lncRNA	-	-
ENST00000773955.1	LINC02614-254	445	No protein	-	lncRNA	-	-
ENST00000774189.1	LINC02614-310	428	No protein	-	lncRNA	-	-
ENST00000510244.1	LINC02614-202	427	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000774192.1	LINC02614-313	425	No protein	-	lncRNA	-	-
ENST00000609312.3	LINC02614-211	422	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000773942.1	LINC02614-241	414	No protein	-	lncRNA	-	-
ENST00000773954.1	LINC02614-253	411	No protein	-	lncRNA	-	-
ENST00000774179.1	LINC02614-300	400	No protein	-	lncRNA	-	-
ENST00000622381.4	LINC02614-218	394	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000774190.1	LINC02614-311	377	No protein	-	lncRNA	-	-
ENST00000773938.1	LINC02614-237	363	No protein	-	lncRNA	-	-
ENST00000616043.1	LINC02614-216	353	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000774193.1	LINC02614-314	298	No protein	-	lncRNA	-	-
ENST00000617582.1	LINC02614-217	289	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000774191.1	LINC02614-312	270	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 353 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000616043.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

454 RNA-Seq supported [Definitions]

Transcript: ENST00000616043.1 LINC02614-216

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Transcript: ENST00000616043.1 LINC02614-216

Summary

About Us

Get help

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