Transcript: ENST00000613502.1 LINC03125-202

Description

long intergenic non-protein coding RNA 3125 [Source:HGNC Symbol;Acc:HGNC:57012]

Gene Synonyms

INSETG-4

Location

Chromosome 20: 23,187,961-23,190,305 forward strand.

About this transcript

This transcript has 1 exon and maps to 274 oligo probes.

Gene

This transcript is a product of gene ENSG00000230387.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000720384.1	LINC03125-254	956	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000613502.1	LINC03125-202	2345	No protein	-	lncRNA	-	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000660151.2	LINC03125-221	1954	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000651897.1	LINC03125-204	1898	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000671541.1	LINC03125-249	1664	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000720399.1	LINC03125-269	1663	No protein	-	lncRNA	-	-
ENST00000720388.1	LINC03125-258	1615	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000652960.1	LINC03125-205	1613	No protein	-	lncRNA	-	-
ENST00000720395.1	LINC03125-265	1581	No protein	-	lncRNA	-	-
ENST00000671163.1	LINC03125-246	1569	No protein	-	lncRNA	-	-
ENST00000720387.1	LINC03125-257	1565	No protein	-	lncRNA	-	-
ENST00000656333.1	LINC03125-212	1550	No protein	-	lncRNA	-	-
ENST00000661171.1	LINC03125-225	1506	No protein	-	lncRNA	-	-
ENST00000657770.1	LINC03125-214	1504	No protein	-	lncRNA	-	-
ENST00000659548.1	LINC03125-219	1496	No protein	-	lncRNA	-	-
ENST00000671352.1	LINC03125-247	1486	No protein	-	lncRNA	-	-
ENST00000656146.1	LINC03125-211	1480	No protein	-	lncRNA	-	-
ENST00000662891.1	LINC03125-228	1472	No protein	-	lncRNA	-	-
ENST00000669864.1	LINC03125-242	1466	No protein	-	lncRNA	-	-
ENST00000671677.1	LINC03125-251	1459	No protein	-	lncRNA	-	-
ENST00000665491.1	LINC03125-232	1454	No protein	-	lncRNA	-	-
ENST00000658111.1	LINC03125-215	1454	No protein	-	lncRNA	-	-
ENST00000667753.1	LINC03125-237	1449	No protein	-	lncRNA	-	-
ENST00000655027.1	LINC03125-210	1438	No protein	-	lncRNA	-	-
ENST00000720389.1	LINC03125-259	1433	No protein	-	lncRNA	-	-
ENST00000666879.1	LINC03125-234	1415	No protein	-	lncRNA	-	-
ENST00000656699.1	LINC03125-213	1410	No protein	-	lncRNA	-	-
ENST00000654323.1	LINC03125-209	1376	No protein	-	lncRNA	-	-
ENST00000667919.1	LINC03125-238	1364	No protein	-	lncRNA	-	-
ENST00000666551.1	LINC03125-233	1356	No protein	-	lncRNA	-	-
ENST00000671613.1	LINC03125-250	1355	No protein	-	lncRNA	-	-
ENST00000661992.1	LINC03125-227	1348	No protein	-	lncRNA	-	-
ENST00000670920.1	LINC03125-245	1336	No protein	-	lncRNA	-	-
ENST00000653675.1	LINC03125-207	1327	No protein	-	lncRNA	-	-
ENST00000622708.2	LINC03125-203	1310	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000668880.2	LINC03125-240	1269	No protein	-	lncRNA	-	-
ENST00000669811.1	LINC03125-241	1255	No protein	-	lncRNA	-	-
ENST00000658507.1	LINC03125-217	1222	No protein	-	lncRNA	-	-
ENST00000661460.1	LINC03125-226	1215	No protein	-	lncRNA	-	-
ENST00000670224.1	LINC03125-243	1211	No protein	-	lncRNA	-	-
ENST00000720401.1	LINC03125-271	1207	No protein	-	lncRNA	-	-
ENST00000720385.1	LINC03125-255	1157	No protein	-	lncRNA	-	-
ENST00000660909.1	LINC03125-224	1140	No protein	-	lncRNA	-	-
ENST00000660372.1	LINC03125-222	1111	No protein	-	lncRNA	-	-
ENST00000720396.1	LINC03125-266	1075	No protein	-	lncRNA	-	-
ENST00000653694.1	LINC03125-208	1073	No protein	-	lncRNA	-	-
ENST00000668592.1	LINC03125-239	1032	No protein	-	lncRNA	-	-
ENST00000670747.1	LINC03125-244	969	No protein	-	lncRNA	-	-
ENST00000658127.1	LINC03125-216	968	No protein	-	lncRNA	-	-
ENST00000720393.1	LINC03125-263	961	No protein	-	lncRNA	-	-
ENST00000663750.1	LINC03125-230	938	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000720394.1	LINC03125-264	917	No protein	-	lncRNA	-	-
ENST00000660732.1	LINC03125-223	901	No protein	-	lncRNA	-	-
ENST00000653250.2	LINC03125-206	897	No protein	-	lncRNA	-	-
ENST00000667058.1	LINC03125-236	894	No protein	-	lncRNA	-	-
ENST00000659149.2	LINC03125-218	884	No protein	-	lncRNA	-	-
ENST00000720392.1	LINC03125-262	849	No protein	-	lncRNA	-	-
ENST00000659901.2	LINC03125-220	847	No protein	-	lncRNA	-	-
ENST00000665327.1	LINC03125-231	844	No protein	-	lncRNA	-	-
ENST00000666940.1	LINC03125-235	815	No protein	-	lncRNA	-	-
ENST00000720398.1	LINC03125-268	791	No protein	-	lncRNA	-	-
ENST00000720397.1	LINC03125-267	787	No protein	-	lncRNA	-	-
ENST00000720390.1	LINC03125-260	779	No protein	-	lncRNA	-	-
ENST00000687884.2	LINC03125-252	758	No protein	-	lncRNA	-	-
ENST00000671511.4	LINC03125-248	743	No protein	-	lncRNA	-	-
ENST00000720386.1	LINC03125-256	730	No protein	-	lncRNA	-	-
ENST00000720391.1	LINC03125-261	721	No protein	-	lncRNA	-	-
ENST00000411595.2	LINC03125-201	709	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000688260.1	LINC03125-253	661	No protein	-	lncRNA	-	-
ENST00000720404.1	LINC03125-274	653	No protein	-	lncRNA	-	-
ENST00000720402.1	LINC03125-272	638	No protein	-	lncRNA	-	-
ENST00000662902.1	LINC03125-229	636	No protein	-	lncRNA	-	-
ENST00000720400.1	LINC03125-270	633	No protein	-	lncRNA	-	-
ENST00000720403.1	LINC03125-273	587	No protein	-	lncRNA	-	-
ENST00000720405.1	LINC03125-275	510	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 1, Coding exons: 0, Transcript length: 2,345 bps,

Transcript Support Level (TSL)

TSL:NA

Version

ENST00000613502.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000613502.1 LINC03125-202

Summary

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Transcript: ENST00000613502.1 LINC03125-202

Summary

About Us

Get help

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