Transcript: ENST00000610948.2 LINC00467-204

Description

long intergenic non-protein coding RNA 467 [Source:HGNC Symbol;Acc:HGNC:28227]

Gene Synonyms

ASAP, C1ORF97, MGC14801

Location

Chromosome 1: 211,399,143-211,432,537 forward strand.

About this transcript

This transcript has 3 exons and maps to 180 oligo probes.

Gene

This transcript is a product of gene ENSG00000153363.16 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000423222.7	LINC00467-201	3584	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000661331.1	LINC00467-217	1811	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000664255.2	LINC00467-222	1672	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000663693.1	LINC00467-221	1626	No protein	-	lncRNA	-	-
ENST00000534914.6	LINC00467-203	1588	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000662409.2	LINC00467-218	1388	No protein	-	lncRNA	-	-
ENST00000656159.1	LINC00467-211	1079	No protein	-	lncRNA	-	-
ENST00000659698.1	LINC00467-214	948	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000654903.1	LINC00467-209	932	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000818501.1	LINC00467-231	918	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000653287.1	LINC00467-205	898	No protein	-	lncRNA	-	-
ENST00000670353.1	LINC00467-227	881	No protein	-	lncRNA	-	-
ENST00000665802.2	LINC00467-223	871	No protein	-	lncRNA	-	-
ENST00000666134.1	LINC00467-224	850	No protein	-	lncRNA	-	-
ENST00000689408.1	LINC00467-228	843	No protein	-	lncRNA	-	-
ENST00000653498.2	LINC00467-206	831	No protein	-	lncRNA	-	-
ENST00000660130.2	LINC00467-215	821	No protein	-	lncRNA	-	-
ENST00000667464.1	LINC00467-225	819	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000653721.1	LINC00467-207	812	No protein	-	lncRNA	-	-
ENST00000654699.1	LINC00467-208	807	No protein	-	lncRNA	-	-
ENST00000662549.1	LINC00467-219	786	No protein	-	lncRNA	-	-
ENST00000669618.1	LINC00467-226	784	No protein	-	lncRNA	-	-
ENST00000660843.1	LINC00467-216	758	No protein	-	lncRNA	-	-
ENST00000663427.2	LINC00467-220	720	No protein	-	lncRNA	-	-
ENST00000656082.1	LINC00467-210	704	No protein	-	lncRNA	-	-
ENST00000657539.1	LINC00467-213	681	No protein	-	lncRNA	-	-
ENST00000818502.1	LINC00467-232	655	No protein	-	lncRNA	-	-
ENST00000703046.2	LINC00467-229	654	No protein	-	lncRNA	-	-
ENST00000656886.2	LINC00467-212	589	No protein	-	lncRNA	-	-
ENST00000610948.2	LINC00467-204	587	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000818503.1	LINC00467-233	557	No protein	-	lncRNA	-	-
ENST00000448567.2	LINC00467-202	478	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000818500.1	LINC00467-230	423	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 587 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000610948.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000610948.2 LINC00467-204

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Transcript: ENST00000610948.2 LINC00467-204

Summary

About Us

Get help

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