Transcript: ENST00000610560.3 GAL3ST2-202

Description

galactose-3-O-sulfotransferase 2 [Source:HGNC Symbol;Acc:HGNC:24869]

Gene Synonyms

GP3ST

Location

Scaffold HSCHR2_3_CTG15: 11,163-16,306 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 14 domains and features, is associated with 2673 variant alleles and maps to 163 oligo probes.

Gene

This transcript is a product of gene ENSG00000276126.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000610560.3	GAL3ST2-202	1210	389aa	ENSP00000484626.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A0G2JPZ6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000632847.1	GAL3ST2-203	1170	389aa	ENSP00000488118.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A0J9YWU2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,210 bps, Translation length: 389 residues

Transcript Support Level (TSL)

TSL:1

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000610560.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

genome patch truncated [Definitions]

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENST00000610560.3 GAL3ST2-202

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENST00000610560.3 GAL3ST2-202

Summary

About Us

Get help

Our sister sites

Follow us