Transcript: ENST00000606011.2 DNAJC3-DT-202

Description

DNAJC3 divergent transcript [Source:HGNC Symbol;Acc:HGNC:39808]

Gene Synonyms

DNAJC3-AS1

Location

Chromosome 13: 95,648,711-95,676,945 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 11594 variant alleles and maps to 78 oligo probes.

Gene

This transcript is a product of gene ENSG00000247400.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000606011.2	DNAJC3-DT-202	574	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000499499.4	DNAJC3-DT-201	3200	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000671463.2	DNAJC3-DT-204	2927	No protein	-	lncRNA	-	-
ENST00000692031.2	DNAJC3-DT-207	2872	No protein	-	lncRNA	-	-
ENST00000691965.3	DNAJC3-DT-206	2529	No protein	-	lncRNA	-	-
ENST00000662244.2	DNAJC3-DT-203	1731	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000685997.2	DNAJC3-DT-205	1439	No protein	-	lncRNA	-	-
ENST00000743095.1	DNAJC3-DT-213	1369	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000743092.1	DNAJC3-DT-210	1212	No protein	-	lncRNA	-	-
ENST00000743096.1	DNAJC3-DT-214	1139	No protein	-	lncRNA	-	-
ENST00000743093.1	DNAJC3-DT-211	1089	No protein	-	lncRNA	-	-
ENST00000743101.1	DNAJC3-DT-219	1081	No protein	-	lncRNA	-	-
ENST00000743094.1	DNAJC3-DT-212	956	No protein	-	lncRNA	-	-
ENST00000743099.1	DNAJC3-DT-217	924	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000743097.1	DNAJC3-DT-215	915	No protein	-	lncRNA	-	-
ENST00000700803.2	DNAJC3-DT-208	909	No protein	-	lncRNA	-	-
ENST00000743098.1	DNAJC3-DT-216	858	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000743100.1	DNAJC3-DT-218	491	No protein	-	lncRNA	-	-
ENST00000701077.2	DNAJC3-DT-209	474	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 574 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000606011.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENST00000606011.2 DNAJC3-DT-202

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Transcript: ENST00000606011.2 DNAJC3-DT-202

Summary

About Us

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