Transcript: ENST00000603487.1 SMC2-DT-201

Description

SMC2 divergent transcript [Source:HGNC Symbol;Acc:HGNC:50827]

Gene Synonyms

SMC2-AS1

Location

Chromosome 9: 104,080,024-104,092,474 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 4966 variant alleles and maps to 168 oligo probes.

Gene

This transcript is a product of gene ENSG00000270332.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000691653.1	SMC2-DT-204	1398	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000603487.1	SMC2-DT-201	7020	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000664068.2	SMC2-DT-203	2464	No protein	-	lncRNA	-	-
ENST00000701397.1	SMC2-DT-205	1174	No protein	-	lncRNA	-	-
ENST00000701613.1	SMC2-DT-206	1153	No protein	-	lncRNA	-	-
ENST00000603949.1	SMC2-DT-202	672	No protein	-	lncRNA	-	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 7,020 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000603487.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000603487.1 SMC2-DT-201

Summary

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Transcript: ENST00000603487.1 SMC2-DT-201

Summary

About Us

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