Transcript: ENST00000603028.6 USP34-DT-202

Description

USP34 divergent transcript [Source:HGNC Symbol;Acc:HGNC:55262]

Gene Synonyms

AC016727.1

Location

Chromosome 2: 61,471,185-61,483,042 forward strand.

About this transcript

This transcript has 3 exons and maps to 90 oligo probes.

Gene

This transcript is a product of gene ENSG00000270820.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000805155.1	USP34-DT-210	766	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000805182.1	USP34-DT-237	2130	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000805183.1	USP34-DT-238	2126	No protein	-	lncRNA	-	-
ENST00000603199.4	USP34-DT-203	2038	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000603652.3	USP34-DT-204	1812	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000664869.3	USP34-DT-206	1806	No protein	-	lncRNA	-	-
ENST00000805168.1	USP34-DT-223	1694	No protein	-	lncRNA	-	-
ENST00000805169.1	USP34-DT-224	1658	No protein	-	lncRNA	-	-
ENST00000605437.2	USP34-DT-205	1603	No protein	-	lncRNA	-	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000703027.1	USP34-DT-209	1480	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000805167.1	USP34-DT-222	1413	No protein	-	lncRNA	-	-
ENST00000702649.2	USP34-DT-208	1369	No protein	-	lncRNA	-	-
ENST00000805201.1	USP34-DT-256	1287	No protein	-	lncRNA	-	-
ENST00000805191.1	USP34-DT-246	1239	No protein	-	lncRNA	-	-
ENST00000805178.1	USP34-DT-233	1234	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000805188.1	USP34-DT-243	1200	No protein	-	lncRNA	-	-
ENST00000805157.1	USP34-DT-212	1148	No protein	-	lncRNA	-	-
ENST00000805194.1	USP34-DT-249	1048	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000805181.1	USP34-DT-236	1042	No protein	-	lncRNA	-	-
ENST00000805180.1	USP34-DT-235	1032	No protein	-	lncRNA	-	-
ENST00000805163.1	USP34-DT-218	1025	No protein	-	lncRNA	-	-
ENST00000805184.1	USP34-DT-239	1025	No protein	-	lncRNA	-	-
ENST00000805202.1	USP34-DT-257	995	No protein	-	lncRNA	-	-
ENST00000805186.1	USP34-DT-241	984	No protein	-	lncRNA	-	-
ENST00000805195.1	USP34-DT-250	961	No protein	-	lncRNA	-	-
ENST00000805189.1	USP34-DT-244	940	No protein	-	lncRNA	-	-
ENST00000805162.1	USP34-DT-217	929	No protein	-	lncRNA	-	-
ENST00000805196.1	USP34-DT-251	926	No protein	-	lncRNA	-	-
ENST00000805161.1	USP34-DT-216	925	No protein	-	lncRNA	-	-
ENST00000805177.1	USP34-DT-232	910	No protein	-	lncRNA	-	-
ENST00000692738.2	USP34-DT-207	871	No protein	-	lncRNA	-	-
ENST00000805179.1	USP34-DT-234	860	No protein	-	lncRNA	-	-
ENST00000805164.1	USP34-DT-219	851	No protein	-	lncRNA	-	-
ENST00000805200.1	USP34-DT-255	830	No protein	-	lncRNA	-	-
ENST00000805193.1	USP34-DT-248	819	No protein	-	lncRNA	-	-
ENST00000805172.1	USP34-DT-227	817	No protein	-	lncRNA	-	-
ENST00000805190.1	USP34-DT-245	774	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000805176.1	USP34-DT-231	764	No protein	-	lncRNA	-	-
ENST00000805175.1	USP34-DT-230	710	No protein	-	lncRNA	-	-
ENST00000805192.1	USP34-DT-247	706	No protein	-	lncRNA	-	-
ENST00000805159.1	USP34-DT-214	702	No protein	-	lncRNA	-	-
ENST00000603028.6	USP34-DT-202	671	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000805185.1	USP34-DT-240	671	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000805158.1	USP34-DT-213	668	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000805174.1	USP34-DT-229	643	No protein	-	lncRNA	-	-
ENST00000805203.1	USP34-DT-258	632	No protein	-	lncRNA	-	-
ENST00000805171.1	USP34-DT-226	626	No protein	-	lncRNA	-	-
ENST00000805173.1	USP34-DT-228	608	No protein	-	lncRNA	-	-
ENST00000805156.1	USP34-DT-211	591	No protein	-	lncRNA	-	-
ENST00000805160.1	USP34-DT-215	578	No protein	-	lncRNA	-	-
ENST00000805187.1	USP34-DT-242	527	No protein	-	lncRNA	-	-
ENST00000805197.1	USP34-DT-252	513	No protein	-	lncRNA	-	-
ENST00000578974.3	USP34-DT-201	506	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000805165.1	USP34-DT-220	480	No protein	-	lncRNA	-	-
ENST00000805198.1	USP34-DT-253	471	No protein	-	lncRNA	-	-
ENST00000805166.1	USP34-DT-221	468	No protein	-	lncRNA	-	-
ENST00000805170.1	USP34-DT-225	454	No protein	-	lncRNA	-	-
ENST00000805199.1	USP34-DT-254	437	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 671 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000603028.6

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000603028.6 USP34-DT-202

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Transcript: ENST00000603028.6 USP34-DT-202

Summary

About Us

Get help

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