Transcript: ENST00000594688.1 LIPE-AS1-205

Description

LIPE antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:48589]

Location

Chromosome 19: 42,423,755-42,652,019 forward strand.

About this transcript

This transcript has 2 exons and maps to 190 oligo probes.

Gene

This transcript is a product of gene ENSG00000213904.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000750098.1	LIPE-AS1-215	710	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000594688.1	LIPE-AS1-205	2383	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000750174.1	LIPE-AS1-291	2206	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000750112.1	LIPE-AS1-229	1976	No protein	-	lncRNA	-	-
ENST00000750104.1	LIPE-AS1-221	1700	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000594624.8	LIPE-AS1-204	1514	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000457234.2	LIPE-AS1-201	1501	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000750200.1	LIPE-AS1-317	1486	No protein	-	lncRNA	-	-
ENST00000750111.1	LIPE-AS1-228	1457	No protein	-	lncRNA	-	-
ENST00000750108.1	LIPE-AS1-225	1447	No protein	-	lncRNA	-	-
ENST00000750103.1	LIPE-AS1-220	1424	No protein	-	lncRNA	-	-
ENST00000750201.1	LIPE-AS1-318	1403	No protein	-	lncRNA	-	-
ENST00000750139.1	LIPE-AS1-256	1389	No protein	-	lncRNA	-	-
ENST00000750209.1	LIPE-AS1-326	1345	No protein	-	lncRNA	-	-
ENST00000750105.1	LIPE-AS1-222	1343	No protein	-	lncRNA	-	-
ENST00000750173.1	LIPE-AS1-290	1324	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000750188.1	LIPE-AS1-305	1311	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000750154.1	LIPE-AS1-271	1242	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000750102.1	LIPE-AS1-219	1210	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000750205.1	LIPE-AS1-322	1177	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000750149.1	LIPE-AS1-266	1121	No protein	-	lncRNA	-	-
ENST00000689053.2	LIPE-AS1-212	1097	No protein	-	lncRNA	-	-
ENST00000597203.2	LIPE-AS1-207	1094	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000750169.1	LIPE-AS1-286	1037	No protein	-	lncRNA	-	-
ENST00000750109.1	LIPE-AS1-226	1034	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000750194.1	LIPE-AS1-311	1025	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000685574.3	LIPE-AS1-211	983	No protein	-	lncRNA	-	-
ENST00000750152.1	LIPE-AS1-269	983	No protein	-	lncRNA	-	-
ENST00000750113.1	LIPE-AS1-230	977	No protein	-	lncRNA	-	-
ENST00000750202.1	LIPE-AS1-319	968	No protein	-	lncRNA	-	-
ENST00000750144.1	LIPE-AS1-261	953	No protein	-	lncRNA	-	-
ENST00000750129.1	LIPE-AS1-246	952	No protein	-	lncRNA	-	-
ENST00000750156.1	LIPE-AS1-273	946	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000750165.1	LIPE-AS1-282	927	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000750128.1	LIPE-AS1-245	924	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000593740.2	LIPE-AS1-203	922	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000750121.1	LIPE-AS1-238	915	No protein	-	lncRNA	-	-
ENST00000750123.1	LIPE-AS1-240	904	No protein	-	lncRNA	-	-
ENST00000750114.1	LIPE-AS1-231	897	No protein	-	lncRNA	-	-
ENST00000750117.1	LIPE-AS1-234	890	No protein	-	lncRNA	-	-
ENST00000750132.1	LIPE-AS1-249	881	No protein	-	lncRNA	-	-
ENST00000750170.1	LIPE-AS1-287	872	No protein	-	lncRNA	-	-
ENST00000750124.1	LIPE-AS1-241	868	No protein	-	lncRNA	-	-
ENST00000750120.1	LIPE-AS1-237	841	No protein	-	lncRNA	-	-
ENST00000750107.1	LIPE-AS1-224	817	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000661814.1	LIPE-AS1-209	794	No protein	-	lncRNA	-	-
ENST00000750167.1	LIPE-AS1-284	775	No protein	-	lncRNA	-	-
ENST00000750122.1	LIPE-AS1-239	761	No protein	-	lncRNA	-	-
ENST00000750127.1	LIPE-AS1-244	760	No protein	-	lncRNA	-	-
ENST00000750166.1	LIPE-AS1-283	760	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000750203.1	LIPE-AS1-320	752	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000750151.1	LIPE-AS1-268	749	No protein	-	lncRNA	-	-
ENST00000750145.1	LIPE-AS1-262	737	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000750155.1	LIPE-AS1-272	731	No protein	-	lncRNA	-	-
ENST00000750115.1	LIPE-AS1-232	709	No protein	-	lncRNA	-	-
ENST00000750171.1	LIPE-AS1-288	709	No protein	-	lncRNA	-	-
ENST00000750133.1	LIPE-AS1-250	703	No protein	-	lncRNA	-	-
ENST00000750106.1	LIPE-AS1-223	695	No protein	-	lncRNA	-	-
ENST00000750168.1	LIPE-AS1-285	694	No protein	-	lncRNA	-	-
ENST00000750210.1	LIPE-AS1-327	694	No protein	-	lncRNA	-	-
ENST00000750153.1	LIPE-AS1-270	689	No protein	-	lncRNA	-	-
ENST00000750125.1	LIPE-AS1-242	686	No protein	-	lncRNA	-	-
ENST00000750177.1	LIPE-AS1-294	677	No protein	-	lncRNA	-	-
ENST00000750134.1	LIPE-AS1-251	675	No protein	-	lncRNA	-	-
ENST00000750147.1	LIPE-AS1-264	674	No protein	-	lncRNA	-	-
ENST00000750110.1	LIPE-AS1-227	673	No protein	-	lncRNA	-	-
ENST00000701294.2	LIPE-AS1-213	671	No protein	-	lncRNA	-	-
ENST00000750119.1	LIPE-AS1-236	670	No protein	-	lncRNA	-	-
ENST00000750172.1	LIPE-AS1-289	667	No protein	-	lncRNA	-	-
ENST00000750163.1	LIPE-AS1-280	664	No protein	-	lncRNA	-	-
ENST00000750118.1	LIPE-AS1-235	662	No protein	-	lncRNA	-	-
ENST00000750206.1	LIPE-AS1-323	660	No protein	-	lncRNA	-	-
ENST00000750182.1	LIPE-AS1-299	650	No protein	-	lncRNA	-	-
ENST00000750161.1	LIPE-AS1-278	642	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000750116.1	LIPE-AS1-233	636	No protein	-	lncRNA	-	-
ENST00000750175.1	LIPE-AS1-292	631	No protein	-	lncRNA	-	-
ENST00000750176.1	LIPE-AS1-293	630	No protein	-	lncRNA	-	-
ENST00000750100.1	LIPE-AS1-217	629	No protein	-	lncRNA	-	-
ENST00000750204.1	LIPE-AS1-321	627	No protein	-	lncRNA	-	-
ENST00000750131.1	LIPE-AS1-248	626	No protein	-	lncRNA	-	-
ENST00000750146.1	LIPE-AS1-263	620	No protein	-	lncRNA	-	-
ENST00000750141.1	LIPE-AS1-258	617	No protein	-	lncRNA	-	-
ENST00000750180.1	LIPE-AS1-297	613	No protein	-	lncRNA	-	-
ENST00000702399.2	LIPE-AS1-214	607	No protein	-	lncRNA	-	-
ENST00000750164.1	LIPE-AS1-281	603	No protein	-	lncRNA	-	-
ENST00000750136.1	LIPE-AS1-253	597	No protein	-	lncRNA	-	-
ENST00000750143.1	LIPE-AS1-260	593	No protein	-	lncRNA	-	-
ENST00000750162.1	LIPE-AS1-279	591	No protein	-	lncRNA	-	-
ENST00000750208.1	LIPE-AS1-325	586	No protein	-	lncRNA	-	-
ENST00000750158.1	LIPE-AS1-275	584	No protein	-	lncRNA	-	-
ENST00000750148.1	LIPE-AS1-265	580	No protein	-	lncRNA	-	-
ENST00000596116.1	LIPE-AS1-206	573	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000750183.1	LIPE-AS1-300	566	No protein	-	lncRNA	-	-
ENST00000750137.1	LIPE-AS1-254	547	No protein	-	lncRNA	-	-
ENST00000750126.1	LIPE-AS1-243	540	No protein	-	lncRNA	-	-
ENST00000750142.1	LIPE-AS1-259	539	No protein	-	lncRNA	-	-
ENST00000750178.1	LIPE-AS1-295	537	No protein	-	lncRNA	-	-
ENST00000750140.1	LIPE-AS1-257	535	No protein	-	lncRNA	-	-
ENST00000750160.1	LIPE-AS1-277	527	No protein	-	lncRNA	-	-
ENST00000750130.1	LIPE-AS1-247	514	No protein	-	lncRNA	-	-
ENST00000750138.1	LIPE-AS1-255	512	No protein	-	lncRNA	-	-
ENST00000750184.1	LIPE-AS1-301	512	No protein	-	lncRNA	-	-
ENST00000750157.1	LIPE-AS1-274	511	No protein	-	lncRNA	-	-
ENST00000750159.1	LIPE-AS1-276	503	No protein	-	lncRNA	-	-
ENST00000750099.1	LIPE-AS1-216	493	No protein	-	lncRNA	-	-
ENST00000750195.1	LIPE-AS1-312	488	No protein	-	lncRNA	-	-
ENST00000750101.1	LIPE-AS1-218	487	No protein	-	lncRNA	-	-
ENST00000685146.2	LIPE-AS1-210	484	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000750179.1	LIPE-AS1-296	477	No protein	-	lncRNA	-	-
ENST00000750187.1	LIPE-AS1-304	458	No protein	-	lncRNA	-	-
ENST00000750189.1	LIPE-AS1-306	458	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000750207.1	LIPE-AS1-324	455	No protein	-	lncRNA	-	-
ENST00000750198.1	LIPE-AS1-315	440	No protein	-	lncRNA	-	-
ENST00000750190.1	LIPE-AS1-307	439	No protein	-	lncRNA	-	-
ENST00000750196.1	LIPE-AS1-313	412	No protein	-	lncRNA	-	-
ENST00000750197.1	LIPE-AS1-314	399	No protein	-	lncRNA	-	-
ENST00000750191.1	LIPE-AS1-308	398	No protein	-	lncRNA	-	-
ENST00000750150.1	LIPE-AS1-267	381	No protein	-	lncRNA	-	-
ENST00000750185.1	LIPE-AS1-302	370	No protein	-	lncRNA	-	-
ENST00000750193.1	LIPE-AS1-310	363	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000750186.1	LIPE-AS1-303	361	No protein	-	lncRNA	-	-
ENST00000593491.4	LIPE-AS1-202	337	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000750192.1	LIPE-AS1-309	331	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000599276.2	LIPE-AS1-208	315	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000750181.1	LIPE-AS1-298	286	No protein	-	lncRNA	-	-
ENST00000750199.1	LIPE-AS1-316	276	No protein	-	lncRNA	-	-
ENST00000750135.1	LIPE-AS1-252	270	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 2,383 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000594688.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000594688.1 LIPE-AS1-205

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Transcript: ENST00000594688.1 LIPE-AS1-205

Summary

About Us

Get help

Our sister sites

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