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Human (GRCh38.p14)
Description

sphingosine kinase 1 [Source:HGNC Symbol;Acc:HGNC:11240]

Gene Synonyms

SPHK

Location
About this transcript

This transcript has 6 exons, is annotated with 31 domains and features, is associated with 2228 variant alleles and maps to 264 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000592299.6SPHK1-2101816384aaENSP00000465726.2
 
Protein coding
CCDS45785Q9NYA1-1 NM_001142601.2MANE SelectEnsembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS P2TSL:1
ENST00000545180.5SPHK1-2032238384aaENSP00000440970.1
 
Protein coding
CCDS45785Q9NYA1-1 -GENCODE BasicAPPRIS P2TSL:2
ENST00000960428.1SPHK1-2192191398aaENSP00000630487.1
 
Protein coding
CCDS59297--GENCODE PrimaryGENCODE BasicAPPRIS ALT2
ENST00000323374.8SPHK1-2012138470aaENSP00000313681.3
 
Protein coding
CCDS11744Q9NYA1-2 -GENCODE BasicAPPRIS ALT2TSL:1
ENST00000889759.1SPHK1-2141989384aaENSP00000559818.1
 
Protein coding
CCDS45785Q53ZR5 -GENCODE PrimaryGENCODE BasicAPPRIS P2
ENST00000590959.5SPHK1-2071851398aaENSP00000468547.1
 
Protein coding
CCDS59297Q9NYA1-3 -GENCODE BasicAPPRIS ALT2TSL:1
ENST00000889756.1SPHK1-2111782384aaENSP00000559815.1
 
Protein coding
CCDS45785Q53ZR5 -GENCODE BasicAPPRIS P2
ENST00000392496.3SPHK1-2021779384aaENSP00000376285.2
 
Protein coding
CCDS45785Q9NYA1-1 -GENCODE PrimaryGENCODE BasicAPPRIS P2TSL:1
ENST00000960427.1SPHK1-2181765384aaENSP00000630486.1
 
Protein coding
CCDS45785Q53ZR5 -GENCODE BasicAPPRIS P2
ENST00000889758.1SPHK1-2131752384aaENSP00000559817.1
 
Protein coding
CCDS45785Q53ZR5 -GENCODE BasicAPPRIS P2
ENST00000889761.1SPHK1-2161744384aaENSP00000559820.1
 
Protein coding
CCDS45785Q53ZR5 -GENCODE PrimaryGENCODE BasicAPPRIS P2
ENST00000960429.1SPHK1-2201732377aaENSP00000630488.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000889760.1SPHK1-2151710384aaENSP00000559819.1
 
Protein coding
CCDS45785Q53ZR5 -GENCODE BasicAPPRIS P2
ENST00000889757.1SPHK1-2121689377aaENSP00000559816.1
 
Protein coding
--GENCODE Basic
ENST00000889762.1SPHK1-2171632333aaENSP00000559821.1
 
Protein coding
--GENCODE Basic
ENST00000588682.5SPHK1-205858152aaENSP00000466422.1
 
Protein coding
K7EMA4 -TSL:3CDS 3' incomplete
ENST00000590379.5SPHK1-206588111aaENSP00000465002.1
 
Protein coding
K7EJ32 -TSL:3CDS 3' incomplete
ENST00000591651.5SPHK1-2085415aaENSP00000468474.1
 
Protein coding
--TSL:4CDS 3' incomplete
ENST00000591762.1SPHK1-2092502No protein-
 
Retained intron
--TSL:2
ENST00000587167.1SPHK1-204456No protein-
 
Retained intron
--TSL:4
Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,816 bps, Translation length: 384 residues

MANE

This MANE Select transcript contains ENSP00000465726 and matches to NM_001142601.2 and NP_001136073.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NYA1

CCDS

This transcript is a member of the Human CCDS set: CCDS45785

Transcript Support Level (TSL)

TSL:1

Version

ENST00000592299.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.