Transcript: ENST00000589345.8 UCA1-AS1-204

Description

UCA1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:52553]

Gene Synonyms

LINC01764

Location

Chromosome 19: 15,851,988-15,865,032 reverse strand.

About this transcript

This transcript has 3 exons and maps to 98 oligo probes.

Gene

This transcript is a product of gene ENSG00000267308.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000756861.1	UCA1-AS1-212	397	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000756878.1	UCA1-AS1-229	1940	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000756898.1	UCA1-AS1-249	1809	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000756869.1	UCA1-AS1-220	1647	No protein	-	lncRNA	-	-
ENST00000756876.1	UCA1-AS1-227	1225	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000589310.2	UCA1-AS1-203	1198	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000756877.1	UCA1-AS1-228	1123	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000756896.1	UCA1-AS1-247	1079	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000674509.1	UCA1-AS1-207	1054	No protein	-	lncRNA	-	-
ENST00000756874.1	UCA1-AS1-225	961	No protein	-	lncRNA	-	-
ENST00000756879.1	UCA1-AS1-230	912	No protein	-	lncRNA	-	-
ENST00000756881.1	UCA1-AS1-232	910	No protein	-	lncRNA	-	-
ENST00000756870.1	UCA1-AS1-221	890	No protein	-	lncRNA	-	-
ENST00000756884.1	UCA1-AS1-235	844	No protein	-	lncRNA	-	-
ENST00000756872.1	UCA1-AS1-223	820	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000674990.2	UCA1-AS1-208	781	No protein	-	lncRNA	-	-
ENST00000756875.1	UCA1-AS1-226	735	No protein	-	lncRNA	-	-
ENST00000756863.1	UCA1-AS1-214	709	No protein	-	lncRNA	-	-
ENST00000756882.1	UCA1-AS1-233	674	No protein	-	lncRNA	-	-
ENST00000756865.1	UCA1-AS1-216	644	No protein	-	lncRNA	-	-
ENST00000588182.5	UCA1-AS1-202	598	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000756871.1	UCA1-AS1-222	596	No protein	-	lncRNA	-	-
ENST00000589345.8	UCA1-AS1-204	583	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000756868.1	UCA1-AS1-219	577	No protein	-	lncRNA	-	-
ENST00000756889.1	UCA1-AS1-240	576	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000756862.1	UCA1-AS1-213	574	No protein	-	lncRNA	-	-
ENST00000756880.1	UCA1-AS1-231	562	No protein	-	lncRNA	-	-
ENST00000756873.1	UCA1-AS1-224	540	No protein	-	lncRNA	-	-
ENST00000756866.1	UCA1-AS1-217	530	No protein	-	lncRNA	-	-
ENST00000675212.1	UCA1-AS1-209	495	No protein	-	lncRNA	-	-
ENST00000667266.3	UCA1-AS1-206	477	No protein	-	lncRNA	-	-
ENST00000756893.1	UCA1-AS1-244	473	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000715852.1	UCA1-AS1-211	422	No protein	-	lncRNA	-	-
ENST00000756883.1	UCA1-AS1-234	411	No protein	-	lncRNA	-	-
ENST00000756867.1	UCA1-AS1-218	408	No protein	-	lncRNA	-	-
ENST00000692445.2	UCA1-AS1-210	393	No protein	-	lncRNA	-	-
ENST00000756885.1	UCA1-AS1-236	387	No protein	-	lncRNA	-	-
ENST00000587970.1	UCA1-AS1-201	380	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000756886.1	UCA1-AS1-237	365	No protein	-	lncRNA	-	-
ENST00000663214.1	UCA1-AS1-205	355	No protein	-	lncRNA	-	-
ENST00000756888.1	UCA1-AS1-239	352	No protein	-	lncRNA	-	-
ENST00000756892.1	UCA1-AS1-243	342	No protein	-	lncRNA	-	-
ENST00000756895.1	UCA1-AS1-246	338	No protein	-	lncRNA	-	-
ENST00000756894.1	UCA1-AS1-245	321	No protein	-	lncRNA	-	-
ENST00000756897.1	UCA1-AS1-248	320	No protein	-	lncRNA	-	-
ENST00000756864.1	UCA1-AS1-215	317	No protein	-	lncRNA	-	-
ENST00000756887.1	UCA1-AS1-238	316	No protein	-	lncRNA	-	-
ENST00000756891.1	UCA1-AS1-242	313	No protein	-	lncRNA	-	-
ENST00000756890.1	UCA1-AS1-241	279	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 583 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000589345.8

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Annotation Attributes

overlaps pseudogene [Definitions]

Transcript: ENST00000589345.8 UCA1-AS1-204

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Transcript: ENST00000589345.8 UCA1-AS1-204

Summary

About Us

Get help

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