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Human (GRCh38.p14)
Description

ELKS/RAB6-interacting/CAST family member 1 [Source:HGNC Symbol;Acc:HGNC:17072]

Gene Synonyms

CAST2, ELKS, KIAA1081, MGC12974, RAB6IP2

Location
About this transcript

This transcript has 20 exons, is annotated with 40 domains and features and maps to 675 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000360905.9ERC1-20393081116aaENSP00000354158.3
 
Protein coding
CCDS8508Q8IUD2-1 NM_178040.4MANE SelectEnsembl CanonicalGENCODE PrimaryGENCODE BasicTSL:1
ENST00001134601.1ERC1-26193321116aaENSP00000808879.1
 
Protein coding
CCDS8508--Ensembl Canonical ExtendedGENCODE Basic
ENST00000895626.2ERC1-23996521116aaENSP00000565685.1
 
Protein coding
CCDS8508--GENCODE Basic
ENST00000546231.7ERC1-21996221120aaENSP00000442739.2
 
Protein coding
X6RLX0 -GENCODE BasicTSL:5
ENST00000950325.2ERC1-24995051120aaENSP00000620384.1
 
Protein coding
--GENCODE Basic
ENST00000397203.8ERC1-20494931116aaENSP00000380386.4
 
Protein coding
CCDS8508Q8IUD2-1 -GENCODE BasicTSL:5
ENST00000895624.2ERC1-23794911116aaENSP00000565683.1
 
Protein coding
CCDS8508--GENCODE Basic
ENST00000895621.2ERC1-23494621116aaENSP00000565680.1
 
Protein coding
CCDS8508--GENCODE Basic
ENST00000589028.7ERC1-22194441116aaENSP00000468263.1
 
Protein coding
CCDS8508Q8IUD2-1 -GENCODE BasicTSL:1
ENST00000895622.2ERC1-23594091088aaENSP00000565681.1
 
Protein coding
CCDS53732--GENCODE BasicAPPRIS P1
ENST00000895625.2ERC1-23894071088aaENSP00000565684.1
 
Protein coding
CCDS53732--GENCODE BasicAPPRIS P1
ENST00000950324.2ERC1-24893651120aaENSP00000620383.1
 
Protein coding
--GENCODE Basic
ENST00000895630.2ERC1-24393611072aaENSP00000565689.1
 
Protein coding
--GENCODE Basic
ENST00000916652.2ERC1-24593591072aaENSP00000586711.1
 
Protein coding
--GENCODE Basic
ENST00000895627.2ERC1-24093521069aaENSP00000565686.1
 
Protein coding
--GENCODE Basic
ENST00000950327.2ERC1-25193441120aaENSP00000620386.1
 
Protein coding
--GENCODE Basic
ENST00000895631.2ERC1-24492851116aaENSP00000565690.1
 
Protein coding
CCDS8508--GENCODE Basic
ENST00000895623.2ERC1-23692691088aaENSP00000565682.1
 
Protein coding
CCDS53732--GENCODE PrimaryGENCODE BasicAPPRIS P1
ENST00000543086.8ERC1-21392481088aaENSP00000438546.1
 
Protein coding
CCDS53732Q8IUD2-3 -GENCODE PrimaryGENCODE BasicAPPRIS P1TSL:1
ENST00000950328.2ERC1-25292351030aaENSP00000620387.1
 
Protein coding
--GENCODE Basic
ENST00000916653.2ERC1-24692011088aaENSP00000586712.1
 
Protein coding
CCDS53732--GENCODE BasicAPPRIS P1
ENST00000916654.2ERC1-24792001072aaENSP00000586713.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000895629.2ERC1-24290921036aaENSP00000565688.1
 
Protein coding
--GENCODE Basic
ENST00000895628.2ERC1-24190261014aaENSP00000565687.1
 
Protein coding
--GENCODE Basic
ENST00000950326.2ERC1-2508915977aaENSP00000620385.1
 
Protein coding
--GENCODE Basic
ENST00000355446.9ERC1-20257961086aaENSP00000347621.5
 
Protein coding
CCDS76504G8JLD3 -GENCODE BasicTSL:1
ENST00001115956.1ERC1-2604435512aaENSP00000785761.1
 
Protein coding
--GENCODE Basic
ENST00001106224.1ERC1-2553610937aaENSP00000776029.1
 
Protein coding
--GENCODE Basic
ENST00001115953.1ERC1-2573609860aaENSP00000785758.1
 
Protein coding
--GENCODE Basic
ENST00001115954.1ERC1-2583595856aaENSP00000785759.1
 
Protein coding
--GENCODE Basic
ENST00001106225.1ERC1-2563455937aaENSP00000776030.1
 
Protein coding
--GENCODE Basic
ENST00001115955.1ERC1-2593104722aaENSP00000785760.1
 
Protein coding
--GENCODE Basic
ENST00000611180.5ERC1-2242694805aaENSP00000479523.2
 
Protein coding
A0A8J9C065 -TSL:5CDS 3' incomplete
ENST00000545318.3ERC1-2172292682aaENSP00000465628.2
 
Protein coding
K7EKH8 -TSL:3CDS 3' incomplete
ENST00000592048.5ERC1-2231275344aaENSP00000467476.1
 
Protein coding
K7EPP6 -TSL:5CDS 3' incomplete
ENST00000688324.1ERC1-2261025341aaENSP00000510615.1
 
Protein coding
A0A8I5KS52 -CDS 5' and 3' incomplete
ENST00000589132.1ERC1-222868145aaENSP00000464959.1
 
Protein coding
K7EIZ7 -TSL:3CDS 3' incomplete
ENST00000689995.1ERC1-227795265aaENSP00000509777.1
 
Protein coding
A0A8I5QKW1 -CDS 5' and 3' incomplete
ENST00000539802.2ERC1-21055089aaENSP00000467196.1
 
Protein coding
K7EP25 -TSL:2CDS 5' incomplete
ENST00000440394.7ERC1-2057040992aaENSP00000410064.2
 
Nonsense mediated decay
Q8IUD2-2 -TSL:1
ENST00000347735.10ERC1-2014955948aaENSP00000340054.6
 
Nonsense mediated decay
Q8IUD2-4 -TSL:1
ENST00001034786.1ERC1-25445151020aaENSP00000704603.1
 
Nonsense mediated decay
---
ENST00000542302.6ERC1-2124323976aaENSP00000445336.2
 
Nonsense mediated decay
X6RM00 -TSL:5
ENST00000545948.5ERC1-2182881720aaENSP00000442976.1
 
Nonsense mediated decay
Q8IUD2-5 -TSL:1
ENST00000978922.1ERC1-2532495595aaENSP00000648739.1
 
Nonsense mediated decay
---
ENST00000588412.5ERC1-2202071285aaENSP00000467339.1
 
Nonsense mediated decay
K7EPD6 -TSL:2CDS 5' incomplete
ENST00000691177.1ERC1-23267243aaENSP00000510024.1
 
Nonsense mediated decay
A0A8I5KT07 -CDS 5' incomplete
ENST00000691140.1ERC1-2313982No protein-
 
Protein coding CDS not defined
---
ENST00000536573.7ERC1-2073369No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000690948.1ERC1-2292594No protein-
 
Protein coding CDS not defined
---
ENST00000690222.1ERC1-2282589No protein-
 
Protein coding CDS not defined
---
ENST00000515210.2ERC1-206591No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000543263.2ERC1-215513No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000544277.1ERC1-216319No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000686476.1ERC1-2253165No protein-
 
Retained intron
---
ENST00000691018.1ERC1-2303009No protein-
 
Retained intron
---
ENST00000692909.1ERC1-2332452No protein-
 
Retained intron
---
ENST00000543151.1ERC1-2142447No protein-
 
Retained intron
--TSL:2
ENST00000538971.6ERC1-2082267No protein-
 
Retained intron
--TSL:2
ENST00000539007.5ERC1-209748No protein-
 
Retained intron
--TSL:3
ENST00000541503.1ERC1-211531No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 20, Coding exons: 18, Transcript length: 9,444 bps, Translation length: 1,116 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8IUD2

CCDS

This transcript is a member of the Human CCDS set: CCDS8508

Transcript Support Level (TSL)

TSL:1

Version

ENST00000589028.7

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

alternative 5' UTR [Definitions]

upstream uORF

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.