Transcript: ENST00000585964.3

Description

novel transcript

Location

Chromosome 19: 9,690,076-9,700,674 reverse strand.

About this transcript

This transcript has 6 exons and maps to 274 oligo probes.

Gene

This transcript is a product of gene ENSG00000291231.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000779066.1	-	786	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000687404.2	-	2046	No protein	-	lncRNA	-	-
ENST00000585964.3	-	1935	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000536819.6	-	1927	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000779069.1	-	1825	No protein	-	lncRNA	-	-
ENST00000701607.2	-	1823	No protein	-	lncRNA	-	-
ENST00000690130.2	-	1811	No protein	-	lncRNA	-	-
ENST00000701017.1	-	1605	No protein	-	lncRNA	-	-
ENST00000690422.2	-	1576	No protein	-	lncRNA	-	-
ENST00000701886.2	-	1572	No protein	-	lncRNA	-	-
ENST00000779071.1	-	1559	No protein	-	lncRNA	-	-
ENST00000779070.1	-	1364	No protein	-	lncRNA	-	-
ENST00000779075.1	-	1329	No protein	-	lncRNA	-	-
ENST00000779078.1	-	1271	No protein	-	lncRNA	-	-
ENST00000702220.1	-	1213	No protein	-	lncRNA	-	-
ENST00000779073.1	-	1205	No protein	-	lncRNA	-	-
ENST00000779067.1	-	1100	No protein	-	lncRNA	-	-
ENST00000702323.1	-	1080	No protein	-	lncRNA	-	-
ENST00000779072.1	-	1070	No protein	-	lncRNA	-	-
ENST00000779068.1	-	1012	No protein	-	lncRNA	-	-
ENST00000779077.1	-	1005	No protein	-	lncRNA	-	-
ENST00000779074.1	-	953	No protein	-	lncRNA	-	-
ENST00000779076.1	-	758	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 1,935 bps,

Transcript Support Level (TSL)

TSL:4

Version

ENST00000585964.3

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Annotation Attributes

overlaps pseudogene [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000585964.3

Summary

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Transcript: ENST00000585964.3

Summary

About Us

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