Transcript: ENST00000585917.7 LINC02987-202

Description

long intergenic non-protein coding RNA 2987 [Source:HGNC Symbol;Acc:HGNC:56093]

Location

Chromosome 19: 27,793,431-27,807,326 forward strand.

About this transcript

This transcript has 3 exons and maps to 733 oligo probes.

Gene

This transcript is a product of gene ENSG00000267575.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000748540.1	LINC02987-241	1069	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000667196.1	LINC02987-224	5152	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000588784.1	LINC02987-210	2401	No protein	-	lncRNA	-	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000748612.1	LINC02987-313	2391	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000669503.2	LINC02987-229	2372	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000585917.7	LINC02987-202	2365	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000748617.1	LINC02987-318	2225	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000655543.1	LINC02987-216	2135	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000692520.3	LINC02987-237	2112	No protein	-	lncRNA	-	-
ENST00000588318.2	LINC02987-208	1993	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000668186.1	LINC02987-226	1944	No protein	-	lncRNA	-	-
ENST00000666789.2	LINC02987-223	1942	No protein	-	lncRNA	-	-
ENST00000669826.2	LINC02987-230	1912	No protein	-	lncRNA	-	-
ENST00000685134.2	LINC02987-233	1911	No protein	-	lncRNA	-	-
ENST00000669909.1	LINC02987-231	1858	No protein	-	lncRNA	-	-
ENST00000692210.3	LINC02987-236	1842	No protein	-	lncRNA	-	-
ENST00000693578.3	LINC02987-238	1815	No protein	-	lncRNA	-	-
ENST00000592404.6	LINC02987-213	1796	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000748562.1	LINC02987-263	1785	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000659857.3	LINC02987-218	1772	No protein	-	lncRNA	-	-
ENST00000686618.2	LINC02987-234	1761	No protein	-	lncRNA	-	-
ENST00000668414.1	LINC02987-227	1755	No protein	-	lncRNA	-	-
ENST00000748544.1	LINC02987-245	1719	No protein	-	lncRNA	-	-
ENST00000748551.1	LINC02987-252	1717	No protein	-	lncRNA	-	-
ENST00000663452.3	LINC02987-221	1711	No protein	-	lncRNA	-	-
ENST00000587188.2	LINC02987-206	1696	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000748541.1	LINC02987-242	1667	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000748545.1	LINC02987-246	1650	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000588122.6	LINC02987-207	1641	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000653426.1	LINC02987-215	1631	No protein	-	lncRNA	-	-
ENST00000591549.2	LINC02987-212	1586	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000588636.2	LINC02987-209	1551	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000748561.1	LINC02987-262	1539	No protein	-	lncRNA	-	-
ENST00000748619.1	LINC02987-320	1507	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000656827.1	LINC02987-217	1495	No protein	-	lncRNA	-	-
ENST00000664065.1	LINC02987-222	1463	No protein	-	lncRNA	-	-
ENST00000748552.1	LINC02987-253	1432	No protein	-	lncRNA	-	-
ENST00000748563.1	LINC02987-264	1432	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000716038.1	LINC02987-240	1421	No protein	-	lncRNA	-	-
ENST00000748575.1	LINC02987-276	1412	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000748569.1	LINC02987-270	1390	No protein	-	lncRNA	-	-
ENST00000748554.1	LINC02987-255	1350	No protein	-	lncRNA	-	-
ENST00000748550.1	LINC02987-251	1337	No protein	-	lncRNA	-	-
ENST00000590628.1	LINC02987-211	1335	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000748622.1	LINC02987-323	1335	No protein	-	lncRNA	-	-
ENST00000748594.1	LINC02987-295	1331	No protein	-	lncRNA	-	-
ENST00000748585.1	LINC02987-286	1327	No protein	-	lncRNA	-	-
ENST00000748596.1	LINC02987-297	1321	No protein	-	lncRNA	-	-
ENST00000748546.1	LINC02987-247	1320	No protein	-	lncRNA	-	-
ENST00000748584.1	LINC02987-285	1318	No protein	-	lncRNA	-	-
ENST00000748587.1	LINC02987-288	1315	No protein	-	lncRNA	-	-
ENST00000748568.1	LINC02987-269	1310	No protein	-	lncRNA	-	-
ENST00000748583.1	LINC02987-284	1302	No protein	-	lncRNA	-	-
ENST00000748623.1	LINC02987-324	1277	No protein	-	lncRNA	-	-
ENST00000748567.1	LINC02987-268	1276	No protein	-	lncRNA	-	-
ENST00000748606.1	LINC02987-307	1267	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000670399.1	LINC02987-232	1264	No protein	-	lncRNA	-	-
ENST00000748590.1	LINC02987-291	1264	No protein	-	lncRNA	-	-
ENST00000748624.1	LINC02987-325	1258	No protein	-	lncRNA	-	-
ENST00000748620.1	LINC02987-321	1254	No protein	-	lncRNA	-	-
ENST00000748599.1	LINC02987-300	1251	No protein	-	lncRNA	-	-
ENST00000748602.1	LINC02987-303	1239	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000748603.1	LINC02987-304	1202	No protein	-	lncRNA	-	-
ENST00000748542.1	LINC02987-243	1201	No protein	-	lncRNA	-	-
ENST00000748597.1	LINC02987-298	1197	No protein	-	lncRNA	-	-
ENST00000748598.1	LINC02987-299	1185	No protein	-	lncRNA	-	-
ENST00000748595.1	LINC02987-296	1158	No protein	-	lncRNA	-	-
ENST00000748600.1	LINC02987-301	1125	No protein	-	lncRNA	-	-
ENST00000748559.1	LINC02987-260	1124	No protein	-	lncRNA	-	-
ENST00000748579.1	LINC02987-280	1116	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000748607.1	LINC02987-308	1112	No protein	-	lncRNA	-	-
ENST00000748557.1	LINC02987-258	1111	No protein	-	lncRNA	-	-
ENST00000748589.1	LINC02987-290	1108	No protein	-	lncRNA	-	-
ENST00000748586.1	LINC02987-287	1104	No protein	-	lncRNA	-	-
ENST00000667566.2	LINC02987-225	1098	No protein	-	lncRNA	-	-
ENST00000748547.1	LINC02987-248	1075	No protein	-	lncRNA	-	-
ENST00000748549.1	LINC02987-250	1055	No protein	-	lncRNA	-	-
ENST00000748560.1	LINC02987-261	1052	No protein	-	lncRNA	-	-
ENST00000748556.1	LINC02987-257	1048	No protein	-	lncRNA	-	-
ENST00000748565.1	LINC02987-266	1043	No protein	-	lncRNA	-	-
ENST00000748543.1	LINC02987-244	1035	No protein	-	lncRNA	-	-
ENST00000748558.1	LINC02987-259	1023	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000748548.1	LINC02987-249	1020	No protein	-	lncRNA	-	-
ENST00000748616.1	LINC02987-317	1020	No protein	-	lncRNA	-	-
ENST00000748572.1	LINC02987-273	1012	No protein	-	lncRNA	-	-
ENST00000748626.1	LINC02987-327	987	No protein	-	lncRNA	-	-
ENST00000748571.1	LINC02987-272	964	No protein	-	lncRNA	-	-
ENST00000748555.1	LINC02987-256	957	No protein	-	lncRNA	-	-
ENST00000748605.1	LINC02987-306	953	No protein	-	lncRNA	-	-
ENST00000748581.1	LINC02987-282	947	No protein	-	lncRNA	-	-
ENST00000748621.1	LINC02987-322	938	No protein	-	lncRNA	-	-
ENST00000748588.1	LINC02987-289	925	No protein	-	lncRNA	-	-
ENST00000592806.1	LINC02987-214	924	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000748609.1	LINC02987-310	884	No protein	-	lncRNA	-	-
ENST00000748610.1	LINC02987-311	880	No protein	-	lncRNA	-	-
ENST00000748576.1	LINC02987-277	873	No protein	-	lncRNA	-	-
ENST00000748573.1	LINC02987-274	872	No protein	-	lncRNA	-	-
ENST00000748604.1	LINC02987-305	868	No protein	-	lncRNA	-	-
ENST00000748627.1	LINC02987-328	862	No protein	-	lncRNA	-	-
ENST00000748566.1	LINC02987-267	858	No protein	-	lncRNA	-	-
ENST00000661017.1	LINC02987-220	855	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000748618.1	LINC02987-319	855	No protein	-	lncRNA	-	-
ENST00000748625.1	LINC02987-326	826	No protein	-	lncRNA	-	-
ENST00000668903.2	LINC02987-228	818	No protein	-	lncRNA	-	-
ENST00000748570.1	LINC02987-271	791	No protein	-	lncRNA	-	-
ENST00000748553.1	LINC02987-254	781	No protein	-	lncRNA	-	-
ENST00000748628.1	LINC02987-329	767	No protein	-	lncRNA	-	-
ENST00000748631.1	LINC02987-332	740	No protein	-	lncRNA	-	-
ENST00000660309.1	LINC02987-219	736	No protein	-	lncRNA	-	-
ENST00000748577.1	LINC02987-278	724	No protein	-	lncRNA	-	-
ENST00000748608.1	LINC02987-309	724	No protein	-	lncRNA	-	-
ENST00000748578.1	LINC02987-279	716	No protein	-	lncRNA	-	-
ENST00000586220.2	LINC02987-203	715	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000748574.1	LINC02987-275	712	No protein	-	lncRNA	-	-
ENST00000748564.1	LINC02987-265	700	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000586784.2	LINC02987-205	696	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000748582.1	LINC02987-283	695	No protein	-	lncRNA	-	-
ENST00000748629.1	LINC02987-330	683	No protein	-	lncRNA	-	-
ENST00000748593.1	LINC02987-294	669	No protein	-	lncRNA	-	-
ENST00000748580.1	LINC02987-281	665	No protein	-	lncRNA	-	-
ENST00000748632.1	LINC02987-333	644	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000748601.1	LINC02987-302	626	No protein	-	lncRNA	-	-
ENST00000748630.1	LINC02987-331	562	No protein	-	lncRNA	-	-
ENST00000701913.2	LINC02987-239	541	No protein	-	lncRNA	-	-
ENST00000748592.1	LINC02987-293	541	No protein	-	lncRNA	-	-
ENST00000585827.1	LINC02987-201	539	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000748614.1	LINC02987-315	499	No protein	-	lncRNA	-	-
ENST00000586473.3	LINC02987-204	485	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000748613.1	LINC02987-314	473	No protein	-	lncRNA	-	-
ENST00000748615.1	LINC02987-316	415	No protein	-	lncRNA	-	-
ENST00000689394.2	LINC02987-235	374	No protein	-	lncRNA	-	-
ENST00000748591.1	LINC02987-292	329	No protein	-	lncRNA	-	-
ENST00000748611.1	LINC02987-312	310	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 2,365 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000585917.7

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000585917.7 LINC02987-202

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Transcript: ENST00000585917.7 LINC02987-202

Summary

About Us

Get help

Our sister sites

Follow us