Transcript: ENST00000578723.6

Description

novel transcript

Location

Chromosome 8: 144,700,592-144,709,587 forward strand.

About this transcript

This transcript has 3 exons and maps to 246 oligo probes.

Gene

This transcript is a product of gene ENSG00000290885.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000775706.1	-	843	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000528794.4	-	3046	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000775709.1	-	2923	No protein	-	lncRNA	-	-
ENST00000775711.1	-	2910	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000578723.6	-	2905	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000524514.2	-	2830	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000775710.1	-	2795	No protein	-	lncRNA	-	-
ENST00000775712.1	-	1870	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000775713.1	-	1765	No protein	-	lncRNA	-	-
ENST00000775714.1	-	1745	No protein	-	lncRNA	-	-
ENST00000775715.1	-	1225	No protein	-	lncRNA	-	-
ENST00000775720.1	-	1178	No protein	-	lncRNA	-	-
ENST00000775716.1	-	1075	No protein	-	lncRNA	-	-
ENST00000775707.1	-	1031	No protein	-	lncRNA	-	-
ENST00000775718.1	-	1003	No protein	-	lncRNA	-	-
ENST00000775721.1	-	996	No protein	-	lncRNA	-	-
ENST00000775717.1	-	990	No protein	-	lncRNA	-	-
ENST00000775719.1	-	962	No protein	-	lncRNA	-	-
ENST00000775708.1	-	916	No protein	-	lncRNA	-	-
ENST00000775733.1	-	848	No protein	-	lncRNA	-	-
ENST00000775722.1	-	745	No protein	-	lncRNA	-	-
ENST00000529026.1	-	661	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000775732.1	-	660	No protein	-	lncRNA	-	-
ENST00000775723.1	-	528	No protein	-	lncRNA	-	-
ENST00000775728.1	-	528	No protein	-	lncRNA	-	-
ENST00000775724.1	-	505	No protein	-	lncRNA	-	-
ENST00000775727.1	-	498	No protein	-	lncRNA	-	-
ENST00000775730.1	-	491	No protein	-	lncRNA	-	-
ENST00000775725.1	-	489	No protein	-	lncRNA	-	-
ENST00000775726.1	-	480	No protein	-	lncRNA	-	-
ENST00000775729.1	-	480	No protein	-	lncRNA	-	-
ENST00000775731.1	-	458	No protein	-	lncRNA	-	-
ENST00000775734.1	-	219	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 2,905 bps,

Transcript Support Level (TSL)

TSL:4

Version

ENST00000578723.6

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Annotation Attributes

overlaps pseudogene [Definitions]

Transcript: ENST00000578723.6

Summary

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Transcript: ENST00000578723.6

Summary

About Us

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