Transcript: ENST00000563252.3 CD2BP2-DT-201

Description

CD2BP2 divergent transcript [Source:HGNC Symbol;Acc:HGNC:53029]

Location

Chromosome 16: 30,355,416-30,357,116 forward strand.

About this transcript

This transcript has 2 exons and maps to 99 oligo probes.

Gene

This transcript is a product of gene ENSG00000260219.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000762115.1	CD2BP2-DT-207	371	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000690312.2	CD2BP2-DT-205	2752	No protein	-	lncRNA	-	-
ENST00000701321.2	CD2BP2-DT-206	1713	No protein	-	lncRNA	-	-
ENST00000762131.1	CD2BP2-DT-223	1390	No protein	-	lncRNA	-	-
ENST00000688695.2	CD2BP2-DT-203	1367	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000762121.1	CD2BP2-DT-213	1335	No protein	-	lncRNA	-	-
ENST00000762129.1	CD2BP2-DT-221	1320	No protein	-	lncRNA	-	-
ENST00000762126.1	CD2BP2-DT-218	1169	No protein	-	lncRNA	-	-
ENST00000688846.3	CD2BP2-DT-204	1148	No protein	-	lncRNA	-	-
ENST00000762127.1	CD2BP2-DT-219	1050	No protein	-	lncRNA	-	-
ENST00000762124.1	CD2BP2-DT-216	1040	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000762117.1	CD2BP2-DT-209	1038	No protein	-	lncRNA	-	-
ENST00000563252.3	CD2BP2-DT-201	1029	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000687080.2	CD2BP2-DT-202	980	No protein	-	lncRNA	-	-
ENST00000762118.1	CD2BP2-DT-210	971	No protein	-	lncRNA	-	-
ENST00000762134.1	CD2BP2-DT-226	970	No protein	-	lncRNA	-	-
ENST00000762125.1	CD2BP2-DT-217	964	No protein	-	lncRNA	-	-
ENST00000762123.1	CD2BP2-DT-215	959	No protein	-	lncRNA	-	-
ENST00000762133.1	CD2BP2-DT-225	948	No protein	-	lncRNA	-	-
ENST00000762130.1	CD2BP2-DT-222	945	No protein	-	lncRNA	-	-
ENST00000762132.1	CD2BP2-DT-224	908	No protein	-	lncRNA	-	-
ENST00000762119.1	CD2BP2-DT-211	906	No protein	-	lncRNA	-	-
ENST00000762138.1	CD2BP2-DT-230	896	No protein	-	lncRNA	-	-
ENST00000762128.1	CD2BP2-DT-220	865	No protein	-	lncRNA	-	-
ENST00000762122.1	CD2BP2-DT-214	861	No protein	-	lncRNA	-	-
ENST00000762137.1	CD2BP2-DT-229	848	No protein	-	lncRNA	-	-
ENST00000762139.1	CD2BP2-DT-231	804	No protein	-	lncRNA	-	-
ENST00000762135.1	CD2BP2-DT-227	623	No protein	-	lncRNA	-	-
ENST00000762136.1	CD2BP2-DT-228	541	No protein	-	lncRNA	-	-
ENST00000762120.1	CD2BP2-DT-212	468	No protein	-	lncRNA	-	-
ENST00000762116.1	CD2BP2-DT-208	348	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,029 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000563252.3

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000563252.3 CD2BP2-DT-201

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Transcript: ENST00000563252.3 CD2BP2-DT-201

Summary

About Us

Get help

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