Transcript: ENST00000561762.3

Description

novel transcript, antisense to TMC5

Location

Chromosome 16: 19,476,746-19,487,964 reverse strand.

About this transcript

This transcript has 3 exons and maps to 17 oligo probes.

Gene

This transcript is a product of gene ENSG00000260592.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000702436.2	-	782	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000561762.3	-	868	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000805115.1	-	848	No protein	-	lncRNA	-	-
ENST00000805117.1	-	611	No protein	-	lncRNA	-	-
ENST00000805114.1	-	572	No protein	-	lncRNA	-	-
ENST00000805116.1	-	411	No protein	-	lncRNA	-	-
ENST00000805113.1	-	293	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 868 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000561762.3

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000561762.3

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENST00000561762.3

Summary

About Us

Get help

Our sister sites

Follow us