Transcript: ENST00000560800.5 NR2F2-AS1-209

Description

NR2F2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:44222]

Location

Chromosome 15: 96,127,369-96,327,021 reverse strand.

About this transcript

This transcript has 5 exons and maps to 175 oligo probes.

Gene

This transcript is a product of gene ENSG00000247809.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000616608.2	NR2F2-AS1-213	3572	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000624299.1	NR2F2-AS1-217	4198	No protein	-	lncRNA	-	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000743207.1	NR2F2-AS1-332	2424	No protein	-	lncRNA	-	-
ENST00000743212.1	NR2F2-AS1-337	2208	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000743105.1	NR2F2-AS1-230	2163	No protein	-	lncRNA	-	-
ENST00000743203.1	NR2F2-AS1-328	2127	No protein	-	lncRNA	-	-
ENST00000743108.1	NR2F2-AS1-233	2081	No protein	-	lncRNA	-	-
ENST00000743160.1	NR2F2-AS1-285	2012	No protein	-	lncRNA	-	-
ENST00000743169.1	NR2F2-AS1-294	1971	No protein	-	lncRNA	-	-
ENST00000502125.7	NR2F2-AS1-201	1963	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000743191.1	NR2F2-AS1-316	1916	No protein	-	lncRNA	-	-
ENST00000743201.1	NR2F2-AS1-326	1913	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000743202.1	NR2F2-AS1-327	1903	No protein	-	lncRNA	-	-
ENST00000561402.6	NR2F2-AS1-211	1887	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000743181.1	NR2F2-AS1-306	1875	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000742808.1	NR2F2-AS1-226	1865	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000743196.1	NR2F2-AS1-321	1864	No protein	-	lncRNA	-	-
ENST00000742809.1	NR2F2-AS1-227	1848	No protein	-	lncRNA	-	-
ENST00000743189.1	NR2F2-AS1-314	1837	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000743168.1	NR2F2-AS1-293	1686	No protein	-	lncRNA	-	-
ENST00000743151.1	NR2F2-AS1-276	1684	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000743174.1	NR2F2-AS1-299	1670	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000656585.2	NR2F2-AS1-218	1651	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000743193.1	NR2F2-AS1-318	1641	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000690325.2	NR2F2-AS1-220	1624	No protein	-	lncRNA	-	-
ENST00000743192.1	NR2F2-AS1-317	1567	No protein	-	lncRNA	-	-
ENST00000743107.1	NR2F2-AS1-232	1565	No protein	-	lncRNA	-	-
ENST00000743183.1	NR2F2-AS1-308	1444	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000743170.1	NR2F2-AS1-295	1435	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000558929.6	NR2F2-AS1-203	1426	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000743177.1	NR2F2-AS1-302	1424	No protein	-	lncRNA	-	-
ENST00000743214.1	NR2F2-AS1-339	1418	No protein	-	lncRNA	-	-
ENST00000743225.1	NR2F2-AS1-350	1371	No protein	-	lncRNA	-	-
ENST00000743179.1	NR2F2-AS1-304	1324	No protein	-	lncRNA	-	-
ENST00000743217.1	NR2F2-AS1-342	1324	No protein	-	lncRNA	-	-
ENST00000743188.1	NR2F2-AS1-313	1314	No protein	-	lncRNA	-	-
ENST00000743156.1	NR2F2-AS1-281	1285	No protein	-	lncRNA	-	-
ENST00000743159.1	NR2F2-AS1-284	1277	No protein	-	lncRNA	-	-
ENST00000743145.1	NR2F2-AS1-270	1261	No protein	-	lncRNA	-	-
ENST00000743140.1	NR2F2-AS1-265	1245	No protein	-	lncRNA	-	-
ENST00000620029.4	NR2F2-AS1-216	1223	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000743111.1	NR2F2-AS1-236	1219	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000743190.1	NR2F2-AS1-315	1216	No protein	-	lncRNA	-	-
ENST00000743135.1	NR2F2-AS1-260	1215	No protein	-	lncRNA	-	-
ENST00000661764.2	NR2F2-AS1-219	1202	No protein	-	lncRNA	-	-
ENST00000743204.1	NR2F2-AS1-329	1202	No protein	-	lncRNA	-	-
ENST00000743227.1	NR2F2-AS1-352	1197	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000743129.1	NR2F2-AS1-254	1188	No protein	-	lncRNA	-	-
ENST00000616032.5	NR2F2-AS1-212	1179	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000743178.1	NR2F2-AS1-303	1179	No protein	-	lncRNA	-	-
ENST00000743218.1	NR2F2-AS1-343	1170	No protein	-	lncRNA	-	-
ENST00000743180.1	NR2F2-AS1-305	1163	No protein	-	lncRNA	-	-
ENST00000743223.1	NR2F2-AS1-348	1154	No protein	-	lncRNA	-	-
ENST00000743222.1	NR2F2-AS1-347	1152	No protein	-	lncRNA	-	-
ENST00000743187.1	NR2F2-AS1-312	1144	No protein	-	lncRNA	-	-
ENST00000743147.1	NR2F2-AS1-272	1142	No protein	-	lncRNA	-	-
ENST00000743130.1	NR2F2-AS1-255	1141	No protein	-	lncRNA	-	-
ENST00000743121.1	NR2F2-AS1-246	1137	No protein	-	lncRNA	-	-
ENST00000743146.1	NR2F2-AS1-271	1123	No protein	-	lncRNA	-	-
ENST00000743106.1	NR2F2-AS1-231	1122	No protein	-	lncRNA	-	-
ENST00000743132.1	NR2F2-AS1-257	1122	No protein	-	lncRNA	-	-
ENST00000693368.2	NR2F2-AS1-222	1117	No protein	-	lncRNA	-	-
ENST00000743144.1	NR2F2-AS1-269	1115	No protein	-	lncRNA	-	-
ENST00000557863.7	NR2F2-AS1-202	1112	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000743113.1	NR2F2-AS1-238	1107	No protein	-	lncRNA	-	-
ENST00000743186.1	NR2F2-AS1-311	1094	No protein	-	lncRNA	-	-
ENST00000743126.1	NR2F2-AS1-251	1081	No protein	-	lncRNA	-	-
ENST00000743123.1	NR2F2-AS1-248	1076	No protein	-	lncRNA	-	-
ENST00000743208.1	NR2F2-AS1-333	1065	No protein	-	lncRNA	-	-
ENST00000743211.1	NR2F2-AS1-336	1057	No protein	-	lncRNA	-	-
ENST00000743182.1	NR2F2-AS1-307	1056	No protein	-	lncRNA	-	-
ENST00000700988.2	NR2F2-AS1-223	1034	No protein	-	lncRNA	-	-
ENST00000743128.1	NR2F2-AS1-253	1032	No protein	-	lncRNA	-	-
ENST00000743138.1	NR2F2-AS1-263	1011	No protein	-	lncRNA	-	-
ENST00000559505.2	NR2F2-AS1-205	1010	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000742811.1	NR2F2-AS1-229	1008	No protein	-	lncRNA	-	-
ENST00000743134.1	NR2F2-AS1-259	1006	No protein	-	lncRNA	-	-
ENST00000743115.1	NR2F2-AS1-240	1003	No protein	-	lncRNA	-	-
ENST00000743118.1	NR2F2-AS1-243	1003	No protein	-	lncRNA	-	-
ENST00000743209.1	NR2F2-AS1-334	994	No protein	-	lncRNA	-	-
ENST00000743110.1	NR2F2-AS1-235	991	No protein	-	lncRNA	-	-
ENST00000743142.1	NR2F2-AS1-267	986	No protein	-	lncRNA	-	-
ENST00000743185.1	NR2F2-AS1-310	983	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000743125.1	NR2F2-AS1-250	979	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000743127.1	NR2F2-AS1-252	974	No protein	-	lncRNA	-	-
ENST00000743210.1	NR2F2-AS1-335	967	No protein	-	lncRNA	-	-
ENST00000561344.5	NR2F2-AS1-210	966	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000743137.1	NR2F2-AS1-262	953	No protein	-	lncRNA	-	-
ENST00000743199.1	NR2F2-AS1-324	949	No protein	-	lncRNA	-	-
ENST00000743157.1	NR2F2-AS1-282	932	No protein	-	lncRNA	-	-
ENST00000743158.1	NR2F2-AS1-283	931	No protein	-	lncRNA	-	-
ENST00000743153.1	NR2F2-AS1-278	926	No protein	-	lncRNA	-	-
ENST00000743117.1	NR2F2-AS1-242	908	No protein	-	lncRNA	-	-
ENST00000743131.1	NR2F2-AS1-256	908	No protein	-	lncRNA	-	-
ENST00000742810.1	NR2F2-AS1-228	901	No protein	-	lncRNA	-	-
ENST00000743184.1	NR2F2-AS1-309	898	No protein	-	lncRNA	-	-
ENST00000743213.1	NR2F2-AS1-338	894	No protein	-	lncRNA	-	-
ENST00000743176.1	NR2F2-AS1-301	887	No protein	-	lncRNA	-	-
ENST00000743109.1	NR2F2-AS1-234	886	No protein	-	lncRNA	-	-
ENST00000742807.1	NR2F2-AS1-225	886	No protein	-	lncRNA	-	-
ENST00000743155.1	NR2F2-AS1-280	879	No protein	-	lncRNA	-	-
ENST00000743197.1	NR2F2-AS1-322	875	No protein	-	lncRNA	-	-
ENST00000743230.1	NR2F2-AS1-355	874	No protein	-	lncRNA	-	-
ENST00000692320.1	NR2F2-AS1-221	842	No protein	-	lncRNA	-	-
ENST00000743141.1	NR2F2-AS1-266	835	No protein	-	lncRNA	-	-
ENST00000743166.1	NR2F2-AS1-291	833	No protein	-	lncRNA	-	-
ENST00000743136.1	NR2F2-AS1-261	814	No protein	-	lncRNA	-	-
ENST00000743148.1	NR2F2-AS1-273	803	No protein	-	lncRNA	-	-
ENST00000743206.1	NR2F2-AS1-331	798	No protein	-	lncRNA	-	-
ENST00000743150.1	NR2F2-AS1-275	795	No protein	-	lncRNA	-	-
ENST00000743175.1	NR2F2-AS1-300	795	No protein	-	lncRNA	-	-
ENST00000701840.1	NR2F2-AS1-224	788	No protein	-	lncRNA	-	-
ENST00000743114.1	NR2F2-AS1-239	786	No protein	-	lncRNA	-	-
ENST00000743154.1	NR2F2-AS1-279	785	No protein	-	lncRNA	-	-
ENST00000743198.1	NR2F2-AS1-323	776	No protein	-	lncRNA	-	-
ENST00000743139.1	NR2F2-AS1-264	764	No protein	-	lncRNA	-	-
ENST00000743122.1	NR2F2-AS1-247	755	No protein	-	lncRNA	-	-
ENST00000743116.1	NR2F2-AS1-241	747	No protein	-	lncRNA	-	-
ENST00000743119.1	NR2F2-AS1-244	746	No protein	-	lncRNA	-	-
ENST00000743172.1	NR2F2-AS1-297	745	No protein	-	lncRNA	-	-
ENST00000743143.1	NR2F2-AS1-268	740	No protein	-	lncRNA	-	-
ENST00000743112.1	NR2F2-AS1-237	729	No protein	-	lncRNA	-	-
ENST00000743124.1	NR2F2-AS1-249	729	No protein	-	lncRNA	-	-
ENST00000743163.1	NR2F2-AS1-288	712	No protein	-	lncRNA	-	-
ENST00000743228.1	NR2F2-AS1-353	705	No protein	-	lncRNA	-	-
ENST00000743120.1	NR2F2-AS1-245	693	No protein	-	lncRNA	-	-
ENST00000743205.1	NR2F2-AS1-330	689	No protein	-	lncRNA	-	-
ENST00000743216.1	NR2F2-AS1-341	685	No protein	-	lncRNA	-	-
ENST00000743195.1	NR2F2-AS1-320	680	No protein	-	lncRNA	-	-
ENST00000743173.1	NR2F2-AS1-298	676	No protein	-	lncRNA	-	-
ENST00000743149.1	NR2F2-AS1-274	674	No protein	-	lncRNA	-	-
ENST00000743161.1	NR2F2-AS1-286	668	No protein	-	lncRNA	-	-
ENST00000743200.1	NR2F2-AS1-325	667	No protein	-	lncRNA	-	-
ENST00000743215.1	NR2F2-AS1-340	652	No protein	-	lncRNA	-	-
ENST00000743229.1	NR2F2-AS1-354	638	No protein	-	lncRNA	-	-
ENST00000743133.1	NR2F2-AS1-258	625	No protein	-	lncRNA	-	-
ENST00000743162.1	NR2F2-AS1-287	622	No protein	-	lncRNA	-	-
ENST00000743152.1	NR2F2-AS1-277	614	No protein	-	lncRNA	-	-
ENST00000743219.1	NR2F2-AS1-344	613	No protein	-	lncRNA	-	-
ENST00000743194.1	NR2F2-AS1-319	611	No protein	-	lncRNA	-	-
ENST00000743226.1	NR2F2-AS1-351	599	No protein	-	lncRNA	-	-
ENST00000743224.1	NR2F2-AS1-349	570	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000618776.1	NR2F2-AS1-215	567	No protein	-	lncRNA	-	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000743221.1	NR2F2-AS1-346	553	No protein	-	lncRNA	-	-
ENST00000560800.5	NR2F2-AS1-209	549	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000560170.1	NR2F2-AS1-207	547	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000743164.1	NR2F2-AS1-289	544	No protein	-	lncRNA	-	-
ENST00000743167.1	NR2F2-AS1-292	519	No protein	-	lncRNA	-	-
ENST00000616912.4	NR2F2-AS1-214	518	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000743220.1	NR2F2-AS1-345	494	No protein	-	lncRNA	-	-
ENST00000558935.1	NR2F2-AS1-204	482	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000560010.1	NR2F2-AS1-206	468	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000560395.5	NR2F2-AS1-208	441	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000743165.1	NR2F2-AS1-290	421	No protein	-	lncRNA	-	-
ENST00000743171.1	NR2F2-AS1-296	404	No protein	-	lncRNA	-	-
ENST00000743231.1	NR2F2-AS1-356	346	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 549 bps,

Transcript Support Level (TSL)

TSL:4

Version

ENST00000560800.5

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000560800.5 NR2F2-AS1-209

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Transcript: ENST00000560800.5 NR2F2-AS1-209

Summary

About Us

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