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Human (GRCh38.p14)
Description

RPGR interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:13436]

Gene Synonyms

CORD13, LCA6, RGI1, RPGRIP

Location
About this transcript

This transcript has 21 exons, is annotated with 20 domains and features and maps to 514 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000400017.7RPGRIP1-20240611286aaENSP00000382895.2
 
Protein coding
CCDS45080Q96KN7-1 NM_020366.4MANE SelectEnsembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS P2TSL:1
ENST00000557771.5RPGRIP1-21338701248aaENSP00000451219.1
 
Protein coding
G3V3F7 -GENCODE PrimaryGENCODE BasicAPPRIS ALT2TSL:5
ENST00000556336.5RPGRIP1-2102955943aaENSP00000450445.1
 
Protein coding
G3V236 -GENCODE BasicTSL:5
ENST00000555587.5RPGRIP1-2092371761aaENSP00000451262.1
 
Protein coding
G3V3I7 -TSL:1CDS 5' incomplete
ENST00000382933.8RPGRIP1-2012004612aaENSP00000372391.4
 
Protein coding
CCDS91848Q96KN7-4 -GENCODE PrimaryGENCODE BasicTSL:1
ENST00000557351.1RPGRIP1-211566166aaENSP00000452215.1
 
Protein coding
G3V577 -TSL:4CDS 3' incomplete
ENST00000554303.1RPGRIP1-205429143aaENSP00000450426.1
 
Protein coding
H0YIY1 Q5D221 -TSL:1CDS 5' and 3' incomplete
ENST00000557606.1RPGRIP1-212402134aaENSP00000451719.1
 
Protein coding
H0YJK6 -TSL:5CDS 5' and 3' incomplete
ENST00000555322.5RPGRIP1-207237326aaENSP00000450662.1
 
Nonsense mediated decay
H0YJ18 -TSL:1CDS 5' incomplete
ENST00000555489.5RPGRIP1-208213959aaENSP00000451044.1
 
Nonsense mediated decay
H0YJ99 -TSL:1CDS 5' incomplete
ENST00000553500.5RPGRIP1-203585No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000553927.1RPGRIP1-2042875No protein-
 
Retained intron
--TSL:2
ENST00000554750.1RPGRIP1-206571No protein-
 
Retained intron
--TSL:5
Statistics

Exons: 21, Coding exons: 21, Transcript length: 2,955 bps, Translation length: 943 residues

Transcript Support Level (TSL)

TSL:5

Version

ENST00000556336.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.