Transcript: ENST00000556291.6 LINC02290-202

Description

long intergenic non-protein coding RNA 2290 [Source:HGNC Symbol;Acc:HGNC:53206]

Location

Chromosome 14: 66,111,588-66,123,781 forward strand.

About this transcript

This transcript has 6 exons and maps to 193 oligo probes.

Gene

This transcript is a product of gene ENSG00000258502.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000665713.1	LINC02290-213	1809	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000655653.1	LINC02290-208	2466	No protein	-	lncRNA	-	-
ENST00000667482.1	LINC02290-216	2453	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000667302.1	LINC02290-215	2417	No protein	-	lncRNA	-	-
ENST00000666006.1	LINC02290-214	2358	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000661113.1	LINC02290-211	2103	No protein	-	lncRNA	-	-
ENST00000653569.1	LINC02290-206	1937	No protein	-	lncRNA	-	-
ENST00000653964.1	LINC02290-207	1914	No protein	-	lncRNA	-	-
ENST00000670103.1	LINC02290-219	1840	No protein	-	lncRNA	-	-
ENST00000661737.1	LINC02290-212	1818	No protein	-	lncRNA	-	-
ENST00000671168.1	LINC02290-220	1776	No protein	-	lncRNA	-	-
ENST00000671226.1	LINC02290-221	1667	No protein	-	lncRNA	-	-
ENST00000669231.1	LINC02290-217	1632	No protein	-	lncRNA	-	-
ENST00000775474.1	LINC02290-222	1492	No protein	-	lncRNA	-	-
ENST00000557723.6	LINC02290-205	1400	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000656725.1	LINC02290-209	1364	No protein	-	lncRNA	-	-
ENST00000669805.1	LINC02290-218	1321	No protein	-	lncRNA	-	-
ENST00000659630.1	LINC02290-210	1280	No protein	-	lncRNA	-	-
ENST00000557050.2	LINC02290-204	991	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000556291.6	LINC02290-202	965	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000556662.6	LINC02290-203	861	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000775475.1	LINC02290-223	806	No protein	-	lncRNA	-	-
ENST00000554187.6	LINC02290-201	779	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 965 bps,

Transcript Support Level (TSL)

TSL:4

Version

ENST00000556291.6

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000556291.6 LINC02290-202

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Transcript: ENST00000556291.6 LINC02290-202

Summary

About Us

Get help

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