Transcript: ENST00000555281.2 LINC02207-203

Description

long intergenic non-protein coding RNA 2207 [Source:HGNC Symbol;Acc:HGNC:53073]

Location

Chromosome 15: 93,856,538-93,878,352 forward strand.

About this transcript

This transcript has 4 exons and maps to 129 oligo probes.

Gene

This transcript is a product of gene ENSG00000258476.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000715980.1	LINC02207-261	937	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000711607.1	LINC02207-259	5211	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000663418.1	LINC02207-233	4282	No protein	-	lncRNA	-	-
ENST00000664216.1	LINC02207-238	1954	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000669185.2	LINC02207-250	1751	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000766291.1	LINC02207-295	1735	No protein	-	lncRNA	-	-
ENST00000659318.1	LINC02207-225	1592	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000655932.1	LINC02207-215	1577	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000665888.1	LINC02207-241	1471	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000663183.1	LINC02207-232	1432	No protein	-	lncRNA	-	-
ENST00000665813.2	LINC02207-240	1335	No protein	-	lncRNA	-	-
ENST00000659365.3	LINC02207-226	1320	No protein	-	lncRNA	-	-
ENST00000664215.3	LINC02207-237	1320	No protein	-	lncRNA	-	-
ENST00000669081.1	LINC02207-248	1292	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000554530.5	LINC02207-201	1256	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000655344.1	LINC02207-213	1251	No protein	-	lncRNA	-	-
ENST00000655821.1	LINC02207-214	1250	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000666819.1	LINC02207-243	1208	No protein	-	lncRNA	-	-
ENST00000669164.1	LINC02207-249	1200	No protein	-	lncRNA	-	-
ENST00000653987.1	LINC02207-212	1200	No protein	-	lncRNA	-	-
ENST00000664456.1	LINC02207-239	1200	No protein	-	lncRNA	-	-
ENST00000670913.1	LINC02207-256	1182	No protein	-	lncRNA	-	-
ENST00000657633.1	LINC02207-220	1160	No protein	-	lncRNA	-	-
ENST00000661477.1	LINC02207-229	1159	No protein	-	lncRNA	-	-
ENST00000662634.1	LINC02207-231	1153	No protein	-	lncRNA	-	-
ENST00000656375.1	LINC02207-216	1108	No protein	-	lncRNA	-	-
ENST00000653089.1	LINC02207-208	1071	No protein	-	lncRNA	-	-
ENST00000664063.2	LINC02207-236	1064	No protein	-	lncRNA	-	-
ENST00000653271.1	LINC02207-209	1062	No protein	-	lncRNA	-	-
ENST00000669391.1	LINC02207-251	1040	No protein	-	lncRNA	-	-
ENST00000661341.1	LINC02207-228	1029	No protein	-	lncRNA	-	-
ENST00000669599.1	LINC02207-253	1028	No protein	-	lncRNA	-	-
ENST00000715979.1	LINC02207-260	1021	No protein	-	lncRNA	-	-
ENST00000658249.2	LINC02207-223	1005	No protein	-	lncRNA	-	-
ENST00000766267.1	LINC02207-271	995	No protein	-	lncRNA	-	-
ENST00000663747.1	LINC02207-235	983	No protein	-	lncRNA	-	-
ENST00000669582.1	LINC02207-252	974	No protein	-	lncRNA	-	-
ENST00000657833.1	LINC02207-222	970	No protein	-	lncRNA	-	-
ENST00000670232.1	LINC02207-255	967	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000689945.2	LINC02207-257	959	No protein	-	lncRNA	-	-
ENST00000766281.1	LINC02207-285	941	No protein	-	lncRNA	-	-
ENST00000766262.1	LINC02207-266	931	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000669877.1	LINC02207-254	923	No protein	-	lncRNA	-	-
ENST00000766282.1	LINC02207-286	921	No protein	-	lncRNA	-	-
ENST00000766269.1	LINC02207-273	920	No protein	-	lncRNA	-	-
ENST00000556763.1	LINC02207-206	915	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000766271.1	LINC02207-275	911	No protein	-	lncRNA	-	-
ENST00000666582.1	LINC02207-242	904	No protein	-	lncRNA	-	-
ENST00000667407.1	LINC02207-244	889	No protein	-	lncRNA	-	-
ENST00000663638.1	LINC02207-234	878	No protein	-	lncRNA	-	-
ENST00000657503.1	LINC02207-219	859	No protein	-	lncRNA	-	-
ENST00000657169.2	LINC02207-218	855	No protein	-	lncRNA	-	-
ENST00000653712.2	LINC02207-210	839	No protein	-	lncRNA	-	-
ENST00000766285.1	LINC02207-289	828	No protein	-	lncRNA	-	-
ENST00000555281.2	LINC02207-203	827	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000556030.3	LINC02207-205	807	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000555364.7	LINC02207-204	793	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000668413.1	LINC02207-246	792	No protein	-	lncRNA	-	-
ENST00000766274.1	LINC02207-278	792	No protein	-	lncRNA	-	-
ENST00000668200.2	LINC02207-245	784	No protein	-	lncRNA	-	-
ENST00000661588.1	LINC02207-230	772	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000766284.1	LINC02207-288	769	No protein	-	lncRNA	-	-
ENST00000657668.1	LINC02207-221	768	No protein	-	lncRNA	-	-
ENST00000766279.1	LINC02207-283	767	No protein	-	lncRNA	-	-
ENST00000766268.1	LINC02207-272	761	No protein	-	lncRNA	-	-
ENST00000659027.1	LINC02207-224	717	No protein	-	lncRNA	-	-
ENST00000766286.1	LINC02207-290	713	No protein	-	lncRNA	-	-
ENST00000766263.1	LINC02207-267	706	No protein	-	lncRNA	-	-
ENST00000766278.1	LINC02207-282	704	No protein	-	lncRNA	-	-
ENST00000766265.1	LINC02207-269	701	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000766276.1	LINC02207-280	698	No protein	-	lncRNA	-	-
ENST00000766270.1	LINC02207-274	693	No protein	-	lncRNA	-	-
ENST00000653939.1	LINC02207-211	680	No protein	-	lncRNA	-	-
ENST00000766290.1	LINC02207-294	678	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000766264.1	LINC02207-268	672	No protein	-	lncRNA	-	-
ENST00000766280.1	LINC02207-284	665	No protein	-	lncRNA	-	-
ENST00000690084.2	LINC02207-258	660	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000766287.1	LINC02207-291	652	No protein	-	lncRNA	-	-
ENST00000766277.1	LINC02207-281	650	No protein	-	lncRNA	-	-
ENST00000766261.1	LINC02207-265	630	No protein	-	lncRNA	-	-
ENST00000656752.1	LINC02207-217	629	No protein	-	lncRNA	-	-
ENST00000766288.1	LINC02207-292	617	No protein	-	lncRNA	-	-
ENST00000766273.1	LINC02207-277	608	No protein	-	lncRNA	-	-
ENST00000766283.1	LINC02207-287	591	No protein	-	lncRNA	-	-
ENST00000766293.1	LINC02207-297	579	No protein	-	lncRNA	-	-
ENST00000668781.1	LINC02207-247	566	No protein	-	lncRNA	-	-
ENST00000766266.1	LINC02207-270	563	No protein	-	lncRNA	-	-
ENST00000555255.1	LINC02207-202	561	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000661202.2	LINC02207-227	558	No protein	-	lncRNA	-	-
ENST00000652797.1	LINC02207-207	552	No protein	-	lncRNA	-	-
ENST00000766259.1	LINC02207-263	522	No protein	-	lncRNA	-	-
ENST00000766289.1	LINC02207-293	507	No protein	-	lncRNA	-	-
ENST00000766258.1	LINC02207-262	505	No protein	-	lncRNA	-	-
ENST00000766275.1	LINC02207-279	495	No protein	-	lncRNA	-	-
ENST00000766272.1	LINC02207-276	471	No protein	-	lncRNA	-	-
ENST00000766292.1	LINC02207-296	433	No protein	-	lncRNA	-	-
ENST00000766260.1	LINC02207-264	417	No protein	-	lncRNA	-	-
ENST00000766294.1	LINC02207-298	318	No protein	-	lncRNA	-	-
ENST00000766295.1	LINC02207-299	302	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 827 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000555281.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000555281.2 LINC02207-203

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Transcript: ENST00000555281.2 LINC02207-203

Summary

About Us

Get help

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