Transcript: ENST00000551889.1 LINC01498-202

Description

long intergenic non-protein coding RNA 1498 [Source:HGNC Symbol;Acc:HGNC:51164]

Location

Chromosome 12: 108,459,425-108,473,689 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 6252 variant alleles and maps to 161 oligo probes.

Gene

This transcript is a product of gene ENSG00000247213.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000551889.1	LINC01498-202	549	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000502160.6	LINC01498-201	2984	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000670674.1	LINC01498-203	900	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 549 bps,

Transcript Support Level (TSL)

TSL:4

Version

ENST00000551889.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000551889.1 LINC01498-202

Summary

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Transcript: ENST00000551889.1 LINC01498-202

Summary

About Us

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