Transcript: ENST00000551287.2 LINC02386-202

Description

long intergenic non-protein coding RNA 2386 [Source:HGNC Symbol;Acc:HGNC:53312]

Location

Chromosome 12: 30,294,447-30,296,708 reverse strand.

About this transcript

This transcript has 2 exons and maps to 80 oligo probes.

Gene

This transcript is a product of gene ENSG00000257756.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000824524.1	LINC02386-208	470	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000824537.1	LINC02386-221	998	No protein	-	lncRNA	-	-
ENST00000824533.1	LINC02386-217	751	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000824529.1	LINC02386-213	615	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000663022.2	LINC02386-206	604	No protein	-	lncRNA	-	-
ENST00000824532.1	LINC02386-216	602	No protein	-	lncRNA	-	-
ENST00000824526.1	LINC02386-210	599	No protein	-	lncRNA	-	-
ENST00000655472.2	LINC02386-204	597	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000824528.1	LINC02386-212	589	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000666420.2	LINC02386-207	586	No protein	-	lncRNA	-	-
ENST00000551287.2	LINC02386-202	565	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000824538.1	LINC02386-222	560	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000660164.2	LINC02386-205	548	No protein	-	lncRNA	-	-
ENST00000824531.1	LINC02386-215	547	No protein	-	lncRNA	-	-
ENST00000552182.7	LINC02386-203	536	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000824534.1	LINC02386-218	536	No protein	-	lncRNA	-	-
ENST00000824527.1	LINC02386-211	526	No protein	-	lncRNA	-	-
ENST00000824525.1	LINC02386-209	524	No protein	-	lncRNA	-	-
ENST00000824530.1	LINC02386-214	511	No protein	-	lncRNA	-	-
ENST00000551202.1	LINC02386-201	509	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000824535.1	LINC02386-219	495	No protein	-	lncRNA	-	-
ENST00000824536.1	LINC02386-220	475	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 565 bps,

Transcript Support Level (TSL)

TSL:4

Version

ENST00000551287.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000551287.2 LINC02386-202

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Transcript: ENST00000551287.2 LINC02386-202

Summary

About Us

Get help

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