Transcript: ENST00000550827.5 LINC02327-204

Description

long intergenic non-protein coding RNA 2327 [Source:HGNC Symbol;Acc:HGNC:53247]

Location

Chromosome 14: 28,830,244-28,842,337 forward strand.

About this transcript

This transcript has 4 exons and maps to 171 oligo probes.

Gene

This transcript is a product of gene ENSG00000258038.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000652140.1	LINC02327-210	2873	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000716698.1	LINC02327-230	1751	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000730566.1	LINC02327-236	1670	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000652058.1	LINC02327-209	1626	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000548775.2	LINC02327-202	1495	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000730564.1	LINC02327-234	1468	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000730565.1	LINC02327-235	1343	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000730567.1	LINC02327-237	1326	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000730563.1	LINC02327-233	1299	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000730580.1	LINC02327-250	1259	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000652634.1	LINC02327-211	1252	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000730568.1	LINC02327-238	1250	No protein	-	lncRNA	-	-
ENST00000664085.1	LINC02327-221	1244	No protein	-	lncRNA	-	-
ENST00000660501.2	LINC02327-218	1231	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000668716.1	LINC02327-224	1214	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000671154.1	LINC02327-226	1189	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000716669.1	LINC02327-227	1187	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000730579.1	LINC02327-249	1158	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000657120.1	LINC02327-215	1157	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000650678.1	LINC02327-208	1053	No protein	-	lncRNA	-	-
ENST00000730569.1	LINC02327-239	1039	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000730583.1	LINC02327-253	981	No protein	-	lncRNA	-	-
ENST00000716697.1	LINC02327-229	967	No protein	-	lncRNA	-	-
ENST00000660765.1	LINC02327-220	962	No protein	-	lncRNA	-	-
ENST00000716699.1	LINC02327-231	962	No protein	-	lncRNA	-	-
ENST00000716696.1	LINC02327-228	950	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000657083.1	LINC02327-214	929	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000660700.1	LINC02327-219	904	No protein	-	lncRNA	-	-
ENST00000551588.6	LINC02327-207	901	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000667065.2	LINC02327-223	898	No protein	-	lncRNA	-	-
ENST00000730577.1	LINC02327-247	886	No protein	-	lncRNA	-	-
ENST00000658814.1	LINC02327-217	879	No protein	-	lncRNA	-	-
ENST00000655423.1	LINC02327-212	864	No protein	-	lncRNA	-	-
ENST00000730581.1	LINC02327-251	857	No protein	-	lncRNA	-	-
ENST00000730570.1	LINC02327-240	856	No protein	-	lncRNA	-	-
ENST00000730584.1	LINC02327-254	849	No protein	-	lncRNA	-	-
ENST00000670211.1	LINC02327-225	836	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000730576.1	LINC02327-246	818	No protein	-	lncRNA	-	-
ENST00000730578.1	LINC02327-248	817	No protein	-	lncRNA	-	-
ENST00000730575.1	LINC02327-245	797	No protein	-	lncRNA	-	-
ENST00000656401.1	LINC02327-213	795	No protein	-	lncRNA	-	-
ENST00000730588.1	LINC02327-258	788	No protein	-	lncRNA	-	-
ENST00000730585.1	LINC02327-255	786	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000550827.5	LINC02327-204	777	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000548087.5	LINC02327-201	776	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000730589.1	LINC02327-259	752	No protein	-	lncRNA	-	-
ENST00000730590.1	LINC02327-260	744	No protein	-	lncRNA	-	-
ENST00000551227.1	LINC02327-206	741	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000550122.5	LINC02327-203	738	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000730572.1	LINC02327-242	737	No protein	-	lncRNA	-	-
ENST00000730587.1	LINC02327-257	733	No protein	-	lncRNA	-	-
ENST00000657147.2	LINC02327-216	689	No protein	-	lncRNA	-	-
ENST00000730591.1	LINC02327-261	677	No protein	-	lncRNA	-	-
ENST00000730582.1	LINC02327-252	666	No protein	-	lncRNA	-	-
ENST00000665952.1	LINC02327-222	616	No protein	-	lncRNA	-	-
ENST00000730592.1	LINC02327-262	604	No protein	-	lncRNA	-	-
ENST00000730571.1	LINC02327-241	593	No protein	-	lncRNA	-	-
ENST00000716700.1	LINC02327-232	545	No protein	-	lncRNA	-	-
ENST00000730574.1	LINC02327-244	523	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000730573.1	LINC02327-243	492	No protein	-	lncRNA	-	-
ENST00000550990.1	LINC02327-205	472	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000730593.1	LINC02327-263	385	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000730586.1	LINC02327-256	347	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 777 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000550827.5

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000550827.5 LINC02327-204

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Transcript: ENST00000550827.5 LINC02327-204

Summary

About Us

Get help

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