Transcript: ENST00000545177.5 SERPINB9P1-202

Description

serpin family B member 9 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:28590]

Gene Synonyms

MGC39372

Location

Chromosome 6: 2,854,658-2,881,286 reverse strand.

About this transcript

This transcript has 4 exons and maps to 326 oligo probes.

Gene

This transcript is a product of gene ENSG00000230438.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000786916.1	SERPINB9P1-217	1057	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000661223.1	SERPINB9P1-204	3532	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000690181.2	SERPINB9P1-212	1965	No protein	-	lncRNA	-	-
ENST00000786925.1	SERPINB9P1-226	1942	No protein	-	lncRNA	-	-
ENST00000654948.3	SERPINB9P1-203	1903	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000670540.3	SERPINB9P1-208	1819	No protein	-	lncRNA	-	-
ENST00000668503.1	SERPINB9P1-207	1787	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000786927.1	SERPINB9P1-228	1780	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000686601.3	SERPINB9P1-211	1764	No protein	-	lncRNA	-	-
ENST00000786919.1	SERPINB9P1-220	1669	No protein	-	lncRNA	-	-
ENST00000786917.1	SERPINB9P1-218	1658	No protein	-	lncRNA	-	-
ENST00000786920.1	SERPINB9P1-221	1608	No protein	-	lncRNA	-	-
ENST00000667461.1	SERPINB9P1-206	1606	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000786918.1	SERPINB9P1-219	1589	No protein	-	lncRNA	-	-
ENST00000665261.1	SERPINB9P1-205	1588	No protein	-	lncRNA	-	-
ENST00000786944.1	SERPINB9P1-245	1564	No protein	-	lncRNA	-	-
ENST00000692771.1	SERPINB9P1-214	1520	No protein	-	lncRNA	-	-
ENST00000786947.1	SERPINB9P1-248	1495	No protein	-	lncRNA	-	-
ENST00000786926.1	SERPINB9P1-227	1405	No protein	-	lncRNA	-	-
ENST00000786931.1	SERPINB9P1-232	1360	No protein	-	lncRNA	-	-
ENST00000420981.4	SERPINB9P1-201	1347	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000786923.1	SERPINB9P1-224	1299	No protein	-	lncRNA	-	-
ENST00000786928.1	SERPINB9P1-229	1295	No protein	-	lncRNA	-	-
ENST00000786924.1	SERPINB9P1-225	1284	No protein	-	lncRNA	-	-
ENST00000545177.5	SERPINB9P1-202	1249	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000786945.1	SERPINB9P1-246	1237	No protein	-	lncRNA	-	-
ENST00000701899.1	SERPINB9P1-216	1207	No protein	-	lncRNA	-	-
ENST00000670827.2	SERPINB9P1-209	1207	No protein	-	lncRNA	-	-
ENST00000786934.1	SERPINB9P1-235	1192	No protein	-	lncRNA	-	-
ENST00000786929.1	SERPINB9P1-230	1184	No protein	-	lncRNA	-	-
ENST00000786922.1	SERPINB9P1-223	1171	No protein	-	lncRNA	-	-
ENST00000786921.1	SERPINB9P1-222	1166	No protein	-	lncRNA	-	-
ENST00000786933.1	SERPINB9P1-234	1156	No protein	-	lncRNA	-	-
ENST00000786939.1	SERPINB9P1-240	1147	No protein	-	lncRNA	-	-
ENST00000691153.1	SERPINB9P1-213	1138	No protein	-	lncRNA	-	-
ENST00000786932.1	SERPINB9P1-233	1092	No protein	-	lncRNA	-	-
ENST00000786930.1	SERPINB9P1-231	1063	No protein	-	lncRNA	-	-
ENST00000786946.1	SERPINB9P1-247	1033	No protein	-	lncRNA	-	-
ENST00000786938.1	SERPINB9P1-239	1006	No protein	-	lncRNA	-	-
ENST00000786937.1	SERPINB9P1-238	942	No protein	-	lncRNA	-	-
ENST00000685516.1	SERPINB9P1-210	919	No protein	-	lncRNA	-	-
ENST00000786935.1	SERPINB9P1-236	850	No protein	-	lncRNA	-	-
ENST00000786948.1	SERPINB9P1-249	805	No protein	-	lncRNA	-	-
ENST00000701660.2	SERPINB9P1-215	795	No protein	-	lncRNA	-	-
ENST00000786936.1	SERPINB9P1-237	786	No protein	-	lncRNA	-	-
ENST00000786940.1	SERPINB9P1-241	645	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000786949.1	SERPINB9P1-250	554	No protein	-	lncRNA	-	-
ENST00000786943.1	SERPINB9P1-244	365	No protein	-	lncRNA	-	-
ENST00000786941.1	SERPINB9P1-242	337	No protein	-	lncRNA	-	-
ENST00000786942.1	SERPINB9P1-243	329	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,249 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000545177.5

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000545177.5 SERPINB9P1-202

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Transcript: ENST00000545177.5 SERPINB9P1-202

Summary

About Us

Get help

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