Transcript: ENST00000544461.1 LINC00937-207

Description

long intergenic non-protein coding RNA 937 [Source:HGNC Symbol;Acc:HGNC:48629]

Location

Chromosome 12: 8,295,986-8,396,803 reverse strand.

About this transcript

This transcript has 5 exons and maps to 490 oligo probes.

Gene

This transcript is a product of gene ENSG00000226091.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000734927.1	LINC00937-210	1627	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000656887.1	LINC00937-208	3266	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000544461.1	LINC00937-207	3033	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000538304.1	LINC00937-205	2157	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000734936.1	LINC00937-219	1405	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000734950.1	LINC00937-233	1381	No protein	-	lncRNA	-	-
ENST00000734979.1	LINC00937-262	1232	No protein	-	lncRNA	-	-
ENST00000734956.1	LINC00937-239	1225	No protein	-	lncRNA	-	-
ENST00000734929.1	LINC00937-212	1175	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000536539.2	LINC00937-202	1171	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000734940.1	LINC00937-223	1153	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000734998.1	LINC00937-281	1151	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000734980.1	LINC00937-263	1109	No protein	-	lncRNA	-	-
ENST00000735009.1	LINC00937-292	1095	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000735005.1	LINC00937-288	1094	No protein	-	lncRNA	-	-
ENST00000734995.1	LINC00937-278	1091	No protein	-	lncRNA	-	-
ENST00000536560.2	LINC00937-203	1084	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000734928.1	LINC00937-211	1080	No protein	-	lncRNA	-	-
ENST00000734960.1	LINC00937-243	1063	No protein	-	lncRNA	-	-
ENST00000734971.1	LINC00937-254	1045	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000734965.1	LINC00937-248	1043	No protein	-	lncRNA	-	-
ENST00000734967.1	LINC00937-250	1038	No protein	-	lncRNA	-	-
ENST00000734957.1	LINC00937-240	1030	No protein	-	lncRNA	-	-
ENST00000734999.1	LINC00937-282	1026	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000734996.1	LINC00937-279	1014	No protein	-	lncRNA	-	-
ENST00000735001.1	LINC00937-284	985	No protein	-	lncRNA	-	-
ENST00000734970.1	LINC00937-253	977	No protein	-	lncRNA	-	-
ENST00000734931.1	LINC00937-214	975	No protein	-	lncRNA	-	-
ENST00000734976.1	LINC00937-259	973	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000734992.1	LINC00937-275	973	No protein	-	lncRNA	-	-
ENST00000735004.1	LINC00937-287	965	No protein	-	lncRNA	-	-
ENST00000734938.1	LINC00937-221	948	No protein	-	lncRNA	-	-
ENST00000734997.1	LINC00937-280	940	No protein	-	lncRNA	-	-
ENST00000734991.1	LINC00937-274	910	No protein	-	lncRNA	-	-
ENST00000735002.1	LINC00937-285	910	No protein	-	lncRNA	-	-
ENST00000734937.1	LINC00937-220	902	No protein	-	lncRNA	-	-
ENST00000734939.1	LINC00937-222	871	No protein	-	lncRNA	-	-
ENST00000734973.1	LINC00937-256	870	No protein	-	lncRNA	-	-
ENST00000734978.1	LINC00937-261	865	No protein	-	lncRNA	-	-
ENST00000734932.1	LINC00937-215	860	No protein	-	lncRNA	-	-
ENST00000734974.1	LINC00937-257	858	No protein	-	lncRNA	-	-
ENST00000734975.1	LINC00937-258	857	No protein	-	lncRNA	-	-
ENST00000734966.1	LINC00937-249	852	No protein	-	lncRNA	-	-
ENST00000734942.1	LINC00937-225	849	No protein	-	lncRNA	-	-
ENST00000735008.1	LINC00937-291	844	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000734941.1	LINC00937-224	841	No protein	-	lncRNA	-	-
ENST00000734962.1	LINC00937-245	836	No protein	-	lncRNA	-	-
ENST00000734993.1	LINC00937-276	834	No protein	-	lncRNA	-	-
ENST00000734972.1	LINC00937-255	817	No protein	-	lncRNA	-	-
ENST00000734955.1	LINC00937-238	813	No protein	-	lncRNA	-	-
ENST00000734969.1	LINC00937-252	810	No protein	-	lncRNA	-	-
ENST00000734984.1	LINC00937-267	797	No protein	-	lncRNA	-	-
ENST00000734943.1	LINC00937-226	794	No protein	-	lncRNA	-	-
ENST00000734958.1	LINC00937-241	790	No protein	-	lncRNA	-	-
ENST00000735003.1	LINC00937-286	784	No protein	-	lncRNA	-	-
ENST00000734953.1	LINC00937-236	776	No protein	-	lncRNA	-	-
ENST00000734934.1	LINC00937-217	771	No protein	-	lncRNA	-	-
ENST00000734954.1	LINC00937-237	768	No protein	-	lncRNA	-	-
ENST00000734982.1	LINC00937-265	768	No protein	-	lncRNA	-	-
ENST00000735011.1	LINC00937-294	768	No protein	-	lncRNA	-	-
ENST00000734935.1	LINC00937-218	766	No protein	-	lncRNA	-	-
ENST00000734933.1	LINC00937-216	761	No protein	-	lncRNA	-	-
ENST00000734983.1	LINC00937-266	759	No protein	-	lncRNA	-	-
ENST00000734964.1	LINC00937-247	741	No protein	-	lncRNA	-	-
ENST00000734990.1	LINC00937-273	741	No protein	-	lncRNA	-	-
ENST00000734968.1	LINC00937-251	739	No protein	-	lncRNA	-	-
ENST00000734949.1	LINC00937-232	725	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000734944.1	LINC00937-227	712	No protein	-	lncRNA	-	-
ENST00000735000.1	LINC00937-283	679	No protein	-	lncRNA	-	-
ENST00000735007.1	LINC00937-290	676	No protein	-	lncRNA	-	-
ENST00000693495.2	LINC00937-209	674	No protein	-	lncRNA	-	-
ENST00000734961.1	LINC00937-244	669	No protein	-	lncRNA	-	-
ENST00000734945.1	LINC00937-228	663	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000420040.2	LINC00937-201	662	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000735010.1	LINC00937-293	654	No protein	-	lncRNA	-	-
ENST00000734988.1	LINC00937-271	650	No protein	-	lncRNA	-	-
ENST00000734947.1	LINC00937-230	645	No protein	-	lncRNA	-	-
ENST00000734948.1	LINC00937-231	629	No protein	-	lncRNA	-	-
ENST00000735006.1	LINC00937-289	625	No protein	-	lncRNA	-	-
ENST00000537659.5	LINC00937-204	624	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000734963.1	LINC00937-246	616	No protein	-	lncRNA	-	-
ENST00000734985.1	LINC00937-268	598	No protein	-	lncRNA	-	-
ENST00000734981.1	LINC00937-264	580	No protein	-	lncRNA	-	-
ENST00000734987.1	LINC00937-270	572	No protein	-	lncRNA	-	-
ENST00000734986.1	LINC00937-269	561	No protein	-	lncRNA	-	-
ENST00000734952.1	LINC00937-235	553	No protein	-	lncRNA	-	-
ENST00000734989.1	LINC00937-272	550	No protein	-	lncRNA	-	-
ENST00000735012.1	LINC00937-295	550	No protein	-	lncRNA	-	-
ENST00000735013.1	LINC00937-296	549	No protein	-	lncRNA	-	-
ENST00000734951.1	LINC00937-234	545	No protein	-	lncRNA	-	-
ENST00000734959.1	LINC00937-242	541	No protein	-	lncRNA	-	-
ENST00000734994.1	LINC00937-277	533	No protein	-	lncRNA	-	-
ENST00000734977.1	LINC00937-260	469	No protein	-	lncRNA	-	-
ENST00000734930.1	LINC00937-213	468	No protein	-	lncRNA	-	-
ENST00000539348.5	LINC00937-206	447	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000734946.1	LINC00937-229	338	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 3,033 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000544461.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

overlaps pseudogene [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000544461.1 LINC00937-207

Summary

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Transcript: ENST00000544461.1 LINC00937-207

Summary

About Us

Get help

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