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Human (GRCh38.p14)
Description

transcriptional regulating factor 1 [Source:HGNC Symbol;Acc:HGNC:18273]

Gene Synonyms

BCAR2, DJ139D8.5, HSA277276, RAPA, TREP-132

Location
About this transcript

This transcript has 18 exons, is annotated with 62 domains and features, is associated with 94203 variant alleles and maps to 849 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000695948.1TRERF1-20778441212aaENSP00000512293.1
 
Protein coding
CCDS93925A0A8Q3SI57 NM_001395490.1MANE SelectEnsembl CanonicalGENCODE PrimaryGENCODE Basic
ENST00000541110.5TRERF1-20576461220aaENSP00000439689.1
 
Protein coding
CCDS75455Q05GC8 -GENCODE PrimaryGENCODE BasicAPPRIS ALT2TSL:1
ENST00000695966.1TRERF1-20876001200aaENSP00000512292.1
 
Protein coding
CCDS4867Q96PN7-1 -GENCODE PrimaryGENCODE BasicAPPRIS P4
ENST00000372922.8TRERF1-20472861200aaENSP00000362013.4
 
Protein coding
CCDS4867Q96PN7-1 -GENCODE PrimaryGENCODE BasicAPPRIS P4TSL:1
ENST00000340840.6TRERF1-20141741129aaENSP00000339438.2
 
Protein coding
CCDS93924Q96PN7-5 -GENCODE BasicTSL:5
ENST00000354325.2TRERF1-20241381117aaENSP00000346285.2
 
Protein coding
Q96PN7-4 -GENCODE PrimaryGENCODE BasicAPPRIS ALT2TSL:5
ENST00000695947.1TRERF1-206395589aaENSP00000512280.1
 
Nonsense mediated decay
A0A8Q3WKV2 --
ENST00000372917.9TRERF1-203391989aaENSP00000362008.6
 
Nonsense mediated decay
A0A8Q3WKV2 -TSL:1
Statistics

Exons: 18, Coding exons: 14, Transcript length: 7,646 bps, Translation length: 1,220 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS75455

Transcript Support Level (TSL)

TSL:1

Version

ENST00000541110.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.