Transcript: ENST00000534123.5 SUGT1P4-STRA6LP-CCDC180-204

Description

SUGT1P4-STRA6LP-CCDC180 readthrough [Source:HGNC Symbol;Acc:HGNC:53835]

Location

Chromosome 9: 97,250,829-97,377,098 forward strand.

About this transcript

This transcript has 49 exons, is associated with 53053 variant alleles and maps to 1693 oligo probes.

Gene

This transcript is a product of gene ENSG00000255036.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000375206.6	SUGT1P4-STRA6LP-CCDC180-201	6269	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000534123.5	SUGT1P4-STRA6LP-CCDC180-204	6463	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000529787.2	SUGT1P4-STRA6LP-CCDC180-202	5586	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000532526.5	SUGT1P4-STRA6LP-CCDC180-203	5330	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,

Summary

Statistics

Exons: 49, Coding exons: 0, Transcript length: 6,463 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000534123.5

Type

LncRNA

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000534123.5 SUGT1P4-STRA6LP-CCDC180-204

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Transcript: ENST00000534123.5 SUGT1P4-STRA6LP-CCDC180-204

Summary

About Us

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