Transcript: ENST00000530177.2

Description

novel transcript

Location

Chromosome 11: 127,021,754-127,099,585 forward strand.

About this transcript

This transcript has 8 exons and maps to 280 oligo probes.

Gene

This transcript is a product of gene ENSG00000255087.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000647195.1	-	1994	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000655277.1	-	3543	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000658423.2	-	2518	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000527317.3	-	2353	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000654637.1	-	2334	No protein	-	lncRNA	-	-
ENST00000654648.1	-	1934	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000671272.1	-	1862	No protein	-	lncRNA	-	-
ENST00000663235.1	-	1772	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000656864.1	-	1761	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000530177.2	-	1731	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000702180.1	-	1600	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000666590.1	-	1586	No protein	-	lncRNA	-	-
ENST00000667463.1	-	1563	No protein	-	lncRNA	-	-
ENST00000701695.1	-	1527	No protein	-	lncRNA	-	-
ENST00000666557.1	-	1518	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000656048.1	-	1511	No protein	-	lncRNA	-	-
ENST00000654651.1	-	1500	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000666795.1	-	1439	No protein	-	lncRNA	-	-
ENST00000654691.1	-	1426	No protein	-	lncRNA	-	-
ENST00000671008.1	-	1357	No protein	-	lncRNA	-	-
ENST00000761345.1	-	1317	No protein	-	lncRNA	-	-
ENST00000655623.1	-	1299	No protein	-	lncRNA	-	-
ENST00000665385.1	-	1256	No protein	-	lncRNA	-	-
ENST00000668017.1	-	1237	No protein	-	lncRNA	-	-
ENST00000670481.2	-	1230	No protein	-	lncRNA	-	-
ENST00000642327.1	-	1099	No protein	-	lncRNA	-	-
ENST00000664558.1	-	1097	No protein	-	lncRNA	-	-
ENST00000832058.1	-	1024	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000654157.1	-	1017	No protein	-	lncRNA	-	-
ENST00000667649.1	-	1009	No protein	-	lncRNA	-	-
ENST00000646532.1	-	916	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000686341.2	-	904	No protein	-	lncRNA	-	-
ENST00000665827.1	-	862	No protein	-	lncRNA	-	-
ENST00000657763.2	-	833	No protein	-	lncRNA	-	-
ENST00000761341.1	-	800	No protein	-	lncRNA	-	-
ENST00000761342.1	-	800	No protein	-	lncRNA	-	-
ENST00000832061.1	-	800	No protein	-	lncRNA	-	-
ENST00000832062.1	-	791	No protein	-	lncRNA	-	-
ENST00000832059.1	-	789	No protein	-	lncRNA	-	-
ENST00000832065.1	-	761	No protein	-	lncRNA	-	-
ENST00000832063.1	-	746	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000832066.1	-	716	No protein	-	lncRNA	-	-
ENST00000832067.1	-	704	No protein	-	lncRNA	-	-
ENST00000832072.1	-	688	No protein	-	lncRNA	-	-
ENST00000761343.1	-	675	No protein	-	lncRNA	-	-
ENST00000832057.1	-	656	No protein	-	lncRNA	-	-
ENST00000832064.1	-	573	No protein	-	lncRNA	-	-
ENST00000609688.1	-	561	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000832060.1	-	480	No protein	-	lncRNA	-	-
ENST00000832068.1	-	476	No protein	-	lncRNA	-	-
ENST00000761344.1	-	467	No protein	-	lncRNA	-	-
ENST00000832069.1	-	467	No protein	-	lncRNA	-	-
ENST00000832073.1	-	447	No protein	-	lncRNA	-	-
ENST00000832071.1	-	390	No protein	-	lncRNA	-	-
ENST00000832070.1	-	380	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 8, Coding exons: 0, Transcript length: 1,731 bps,

Transcript Support Level (TSL)

TSL:4

Version

ENST00000530177.2

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000530177.2

Summary

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Transcript: ENST00000530177.2

Summary

About Us

Get help

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