Transcript: ENST00000527672.1

Description

novel transcript

Location

Chromosome 8: 60,918,981-60,966,557 forward strand.

About this transcript

This transcript has 5 exons and maps to 187 oligo probes.

Gene

This transcript is a product of gene ENSG00000254777.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000829322.1	-	755	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000829339.1	-	1985	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000829329.1	-	1717	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000829372.1	-	1301	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000829338.1	-	1073	No protein	-	lncRNA	-	-
ENST00000829365.1	-	1055	No protein	-	lncRNA	-	-
ENST00000829328.1	-	1053	No protein	-	lncRNA	-	-
ENST00000829341.1	-	1042	No protein	-	lncRNA	-	-
ENST00000829340.1	-	1038	No protein	-	lncRNA	-	-
ENST00000829356.1	-	1033	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000829373.1	-	983	No protein	-	lncRNA	-	-
ENST00000829355.1	-	963	No protein	-	lncRNA	-	-
ENST00000829369.1	-	962	No protein	-	lncRNA	-	-
ENST00000527672.1	-	926	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000829336.1	-	926	No protein	-	lncRNA	-	-
ENST00000526936.6	-	918	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000829366.1	-	888	No protein	-	lncRNA	-	-
ENST00000829327.1	-	857	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000829325.1	-	821	No protein	-	lncRNA	-	-
ENST00000829337.1	-	819	No protein	-	lncRNA	-	-
ENST00000829332.1	-	818	No protein	-	lncRNA	-	-
ENST00000829331.1	-	810	No protein	-	lncRNA	-	-
ENST00000829342.1	-	781	No protein	-	lncRNA	-	-
ENST00000829347.1	-	776	No protein	-	lncRNA	-	-
ENST00000829352.1	-	760	No protein	-	lncRNA	-	-
ENST00000829361.1	-	745	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000829343.1	-	735	No protein	-	lncRNA	-	-
ENST00000829333.1	-	730	No protein	-	lncRNA	-	-
ENST00000829357.1	-	719	No protein	-	lncRNA	-	-
ENST00000829374.1	-	704	No protein	-	lncRNA	-	-
ENST00000829346.1	-	696	No protein	-	lncRNA	-	-
ENST00000829353.1	-	686	No protein	-	lncRNA	-	-
ENST00000829358.1	-	681	No protein	-	lncRNA	-	-
ENST00000829348.1	-	669	No protein	-	lncRNA	-	-
ENST00000829334.1	-	647	No protein	-	lncRNA	-	-
ENST00000829326.1	-	644	No protein	-	lncRNA	-	-
ENST00000829359.1	-	634	No protein	-	lncRNA	-	-
ENST00000829345.1	-	621	No protein	-	lncRNA	-	-
ENST00000829351.1	-	586	No protein	-	lncRNA	-	-
ENST00000829344.1	-	585	No protein	-	lncRNA	-	-
ENST00000529234.5	-	580	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000829330.1	-	576	No protein	-	lncRNA	-	-
ENST00000829354.1	-	573	No protein	-	lncRNA	-	-
ENST00000829324.1	-	554	No protein	-	lncRNA	-	-
ENST00000829349.1	-	548	No protein	-	lncRNA	-	-
ENST00000829363.1	-	536	No protein	-	lncRNA	-	-
ENST00000829360.1	-	535	No protein	-	lncRNA	-	-
ENST00000829367.1	-	528	No protein	-	lncRNA	-	-
ENST00000829371.1	-	480	No protein	-	lncRNA	-	-
ENST00000829364.1	-	451	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000829370.1	-	434	No protein	-	lncRNA	-	-
ENST00000829362.1	-	422	No protein	-	lncRNA	-	-
ENST00000829368.1	-	412	No protein	-	lncRNA	-	-
ENST00000829350.1	-	366	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 926 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000527672.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000527672.1

Summary

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Transcript: ENST00000527672.1

Summary

About Us

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