Transcript: ENST00000527161.6 LINC00301-204

Description

long intergenic non-protein coding RNA 301 [Source:HGNC Symbol;Acc:HGNC:28603]

Gene Synonyms

C11ORF64, MGC39681, NCRNA00301

Location

Chromosome 11: 60,647,258-60,687,149 forward strand.

About this transcript

This transcript has 4 exons and maps to 177 oligo probes.

Gene

This transcript is a product of gene ENSG00000293513.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000644084.2	LINC00301-206	1132	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000646374.1	LINC00301-208	1429	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000646346.1	LINC00301-207	1334	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000837608.1	LINC00301-240	1121	No protein	-	lncRNA	-	-
ENST00000837590.1	LINC00301-222	1010	No protein	-	lncRNA	-	-
ENST00000837583.1	LINC00301-215	988	No protein	-	lncRNA	-	-
ENST00000837607.1	LINC00301-239	953	No protein	-	lncRNA	-	-
ENST00000837584.1	LINC00301-216	916	No protein	-	lncRNA	-	-
ENST00000837591.1	LINC00301-223	911	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000837605.1	LINC00301-237	897	No protein	-	lncRNA	-	-
ENST00000837588.1	LINC00301-220	889	No protein	-	lncRNA	-	-
ENST00000320202.9	LINC00301-202	877	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000837604.1	LINC00301-236	875	No protein	-	lncRNA	-	-
ENST00000837602.1	LINC00301-234	860	No protein	-	lncRNA	-	-
ENST00000837597.1	LINC00301-229	853	No protein	-	lncRNA	-	-
ENST00000837603.1	LINC00301-235	852	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000837581.1	LINC00301-213	839	No protein	-	lncRNA	-	-
ENST00000837601.1	LINC00301-233	809	No protein	-	lncRNA	-	-
ENST00000837606.1	LINC00301-238	808	No protein	-	lncRNA	-	-
ENST00000412599.6	LINC00301-203	784	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000837592.1	LINC00301-224	781	No protein	-	lncRNA	-	-
ENST00000527161.6	LINC00301-204	772	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000837593.1	LINC00301-225	754	No protein	-	lncRNA	-	-
ENST00000837600.1	LINC00301-232	747	No protein	-	lncRNA	-	-
ENST00000837589.1	LINC00301-221	739	No protein	-	lncRNA	-	-
ENST00000837577.1	LINC00301-209	734	No protein	-	lncRNA	-	-
ENST00000837582.1	LINC00301-214	731	No protein	-	lncRNA	-	-
ENST00000837598.1	LINC00301-230	727	No protein	-	lncRNA	-	-
ENST00000837594.1	LINC00301-226	676	No protein	-	lncRNA	-	-
ENST00000837609.1	LINC00301-241	668	No protein	-	lncRNA	-	-
ENST00000837586.1	LINC00301-218	652	No protein	-	lncRNA	-	-
ENST00000837579.1	LINC00301-211	605	No protein	-	lncRNA	-	-
ENST00000837610.1	LINC00301-242	592	No protein	-	lncRNA	-	-
ENST00000837596.1	LINC00301-228	579	No protein	-	lncRNA	-	-
ENST00000837587.1	LINC00301-219	575	No protein	-	lncRNA	-	-
ENST00000837595.1	LINC00301-227	573	No protein	-	lncRNA	-	-
ENST00000837578.1	LINC00301-210	561	No protein	-	lncRNA	-	-
ENST00000837599.1	LINC00301-231	536	No protein	-	lncRNA	-	-
ENST00000837585.1	LINC00301-217	500	No protein	-	lncRNA	-	-
ENST00000532591.1	LINC00301-205	470	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000837580.1	LINC00301-212	462	No protein	-	lncRNA	-	-
ENST00000837611.1	LINC00301-243	371	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 772 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000527161.6

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Annotation Attributes

overlaps pseudogene [Definitions]

Transcript: ENST00000527161.6 LINC00301-204

Summary

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Transcript: ENST00000527161.6 LINC00301-204

Summary

About Us

Get help

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