Advanced notice of Ensembl Tools maintenance
Please note that due to planned maintenance, Ensembl Tools will be unavailable from Tuesday, September 9, at 08:30 AM BST until Wednesday, September 10, at 08:30 AM BST.
Jobs submitted during the maintenance window will be queued and processed once maintenance is complete. We apologise for the inconvenience.

Human (GRCh38.p14)
Description

poly(A) binding protein cytoplasmic 1 [Source:HGNC Symbol;Acc:HGNC:8554]

Gene Synonyms

PAB1, PABP1, PABPC2, PABPL1

About this transcript

This transcript has 16 exons, is annotated with 34 domains and features, is associated with 10358 variant alleles and maps to 729 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000318607.10PABPC1-2012861636aaENSP00000313007.5
 
Protein coding
CCDS6289P11940-1 NM_002568.4MANE SelectEnsembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS P3TSL:1
ENST00000938879.1PABPC1-2535652636aaENSP00000608938.1
 
Protein coding
CCDS6289--GENCODE BasicAPPRIS P3
ENST00000900764.1PABPC1-2423553636aaENSP00000570823.1
 
Protein coding
CCDS6289--GENCODE BasicAPPRIS P3
ENST00000676662.1PABPC1-2263322565aaENSP00000503686.1
 
Protein coding
A0A7I2YQE4 -GENCODE Basic
ENST00000677140.1PABPC1-2283274633aaENSP00000503044.1
 
Protein coding
A0A7I2YQ88 -GENCODE Basic
ENST00000677787.1PABPC1-2343145590aaENSP00000504835.1
 
Protein coding
A0A7I2V649 -GENCODE Basic
ENST00000523555.6PABPC1-2223116636aaENSP00000429892.2
 
Protein coding
CCDS6289P11940-1 -GENCODE BasicAPPRIS P3TSL:3
ENST00000677765.1PABPC1-2323085577aaENSP00000503838.1
 
Protein coding
A0A7I2V4N4 -GENCODE Basic
ENST00000520142.2PABPC1-2142877636aaENSP00000430012.2
 
Protein coding
CCDS6289P11940-1 -GENCODE PrimaryGENCODE BasicAPPRIS P3TSL:3
ENST00000951437.1PABPC1-2582849636aaENSP00000621496.1
 
Protein coding
CCDS6289--GENCODE BasicAPPRIS P3
ENST00000522720.2PABPC1-2212845636aaENSP00000429790.2
 
Protein coding
CCDS6289P11940-1 -GENCODE PrimaryGENCODE BasicAPPRIS P3TSL:4
ENST00000520804.2PABPC1-2152839636aaENSP00000428749.2
 
Protein coding
CCDS6289P11940-1 -GENCODE PrimaryGENCODE BasicAPPRIS P3TSL:2
ENST00000951436.1PABPC1-2572811636aaENSP00000621495.1
 
Protein coding
CCDS6289--GENCODE BasicAPPRIS P3
ENST00000677478.1PABPC1-2312798591aaENSP00000504369.1
 
Protein coding
E7EQV3 -GENCODE PrimaryGENCODE Basic
ENST00000900765.1PABPC1-2432778609aaENSP00000570824.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000900763.1PABPC1-2412767604aaENSP00000570822.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000938880.1PABPC1-2542763636aaENSP00000608939.1
 
Protein coding
CCDS6289--GENCODE PrimaryGENCODE BasicAPPRIS P3
ENST00000677380.1PABPC1-2302730565aaENSP00000503421.1
 
Protein coding
A0A7I2YQE4 -GENCODE PrimaryGENCODE Basic
ENST00000521865.6PABPC1-2182718636aaENSP00000429119.2
 
Protein coding
CCDS6289P11940-1 -GENCODE PrimaryGENCODE BasicAPPRIS P3TSL:2
ENST00000900766.1PABPC1-2442638634aaENSP00000570825.1
 
Protein coding
--GENCODE PrimaryGENCODE BasicAPPRIS ALT1
ENST00000900770.1PABPC1-2482626667aaENSP00000570829.1
 
Protein coding
--GENCODE Basic
ENST00000951438.1PABPC1-2592616555aaENSP00000621497.1
 
Protein coding
--GENCODE Basic
ENST00000938882.1PABPC1-2562587633aaENSP00000608941.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000900768.1PABPC1-2462550607aaENSP00000570827.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000900767.1PABPC1-2452534601aaENSP00000570826.1
 
Protein coding
--GENCODE Basic
ENST00000900774.1PABPC1-2522502604aaENSP00000570833.1
 
Protein coding
--GENCODE Basic
ENST00000900771.1PABPC1-2492498625aaENSP00000570830.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000900769.1PABPC1-2472462587aaENSP00000570828.1
 
Protein coding
--GENCODE Basic
ENST00000900773.1PABPC1-2512452636aaENSP00000570832.1
 
Protein coding
CCDS6289--GENCODE BasicAPPRIS P3
ENST00000519004.5PABPC1-2082401591aaENSP00000429594.1
 
Protein coding
E7EQV3 -GENCODE BasicTSL:2
ENST00000522387.5PABPC1-2192331604aaENSP00000429395.1
 
Protein coding
E7ERJ7 -GENCODE PrimaryGENCODE BasicTSL:2
ENST00000522658.6PABPC1-2202313636aaENSP00000428840.2
 
Protein coding
CCDS6289P11940-1 -GENCODE PrimaryGENCODE BasicAPPRIS P3TSL:2
ENST00000679197.1PABPC1-2402295604aaENSP00000503058.1
 
Protein coding
A0A7I2YQ90 -GENCODE PrimaryGENCODE Basic
ENST00000938881.1PABPC1-2552285571aaENSP00000608940.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000900772.1PABPC1-2502237545aaENSP00000570831.1
 
Protein coding
--GENCODE Basic
ENST00000519100.6PABPC1-2092207599aaENSP00000427914.2
 
Protein coding
H0YAR2 -GENCODE BasicTSL:3
ENST00000610907.2PABPC1-2241768588aaENSP00000478108.2
 
Protein coding
A0A087WTT1 -GENCODE BasicTSL:1
ENST00000520868.5PABPC1-216971169aaENSP00000428021.1
 
Protein coding
H0YAS6 -TSL:5CDS 5' incomplete
ENST00000518196.5PABPC1-205631108aaENSP00000430159.1
 
Protein coding
E5RGH3 -TSL:3CDS 3' incomplete
ENST00000518293.5PABPC1-20660842aaENSP00000430716.1
 
Protein coding
H0YC10 -TSL:3CDS 5' incomplete
ENST00000517403.5PABPC1-202560187aaENSP00000428190.1
 
Protein coding
H0YAW6 -TSL:5CDS 5' and 3' incomplete
ENST00000521067.1PABPC1-21749261aaENSP00000428937.1
 
Protein coding
E5RFD8 -TSL:3CDS 3' incomplete
ENST00000517990.5PABPC1-204487136aaENSP00000428030.1
 
Protein coding
H0YAS7 -TSL:5CDS 5' incomplete
ENST00000519363.1PABPC1-21045338aaENSP00000429032.1
 
Protein coding
E5RJM8 -TSL:4CDS 3' incomplete
ENST00000678954.1PABPC1-2393384151aaENSP00000503455.1
 
Nonsense mediated decay
A0A7I2V3J9 --
ENST00000523636.5PABPC1-223818165aaENSP00000428948.1
 
Nonsense mediated decay
H0YB86 -TSL:5CDS 5' incomplete
ENST00000519622.5PABPC1-212667131aaENSP00000427805.1
 
Nonsense mediated decay
H0YAP2 -TSL:5CDS 5' incomplete
ENST00000676655.1PABPC1-2252382No protein-
 
Protein coding CDS not defined
---
ENST00000519596.5PABPC1-211771No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000677892.1PABPC1-2353429No protein-
 
Retained intron
---
ENST00000678709.1PABPC1-2373395No protein-
 
Retained intron
---
ENST00000677775.1PABPC1-2333278No protein-
 
Retained intron
---
ENST00000676976.1PABPC1-2272998No protein-
 
Retained intron
---
ENST00000678290.1PABPC1-2362753No protein-
 
Retained intron
---
ENST00000517921.2PABPC1-2032485No protein-
 
Retained intron
--TSL:5
ENST00000678822.1PABPC1-2382313No protein-
 
Retained intron
---
ENST00000677285.1PABPC1-2291491No protein-
 
Retained intron
---
ENST00000518716.1PABPC1-207694No protein-
 
Retained intron
--TSL:2
ENST00000519848.1PABPC1-213676No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 16, Coding exons: 14, Transcript length: 2,331 bps, Translation length: 604 residues

Transcript Support Level (TSL)

TSL:2

Version

ENST00000522387.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.