Transcript: ENST00000520268.1 GRHL2-DT-201

Description

GRHL2 divergent transcript [Source:NCBI gene (formerly Entrezgene);Acc:107986962]

Gene Synonyms

BX357664

Location

Chromosome 8: 101,461,177-101,492,499 reverse strand.

About this transcript

This transcript has 2 exons and maps to 101 oligo probes.

Gene

This transcript is a product of gene ENSG00000254024.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000716498.1	GRHL2-DT-204	2304	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000716510.1	GRHL2-DT-214	1930	No protein	-	lncRNA	-	-
ENST00000716511.1	GRHL2-DT-215	1768	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000701971.2	GRHL2-DT-203	1476	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000716502.1	GRHL2-DT-208	1267	No protein	-	lncRNA	-	-
ENST00000716505.1	GRHL2-DT-211	1182	No protein	-	lncRNA	-	-
ENST00000716515.1	GRHL2-DT-219	1104	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000690034.2	GRHL2-DT-202	924	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000716500.1	GRHL2-DT-206	857	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000716512.1	GRHL2-DT-216	820	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000716499.1	GRHL2-DT-205	801	No protein	-	lncRNA	-	-
ENST00000716503.1	GRHL2-DT-209	774	No protein	-	lncRNA	-	-
ENST00000716504.1	GRHL2-DT-210	638	No protein	-	lncRNA	-	-
ENST00000716507.1	GRHL2-DT-213	596	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000716514.1	GRHL2-DT-218	572	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000520268.1	GRHL2-DT-201	491	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000716501.1	GRHL2-DT-207	400	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000716513.1	GRHL2-DT-217	388	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000716506.1	GRHL2-DT-212	386	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 491 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000520268.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000520268.1 GRHL2-DT-201

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Transcript: ENST00000520268.1 GRHL2-DT-201

Summary

About Us

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