Transcript: ENST00000517689.1 LINC00967-201

Description

long intergenic non-protein coding RNA 967 [Source:HGNC Symbol;Acc:HGNC:48725]

Location

Chromosome 8: 66,192,709-66,196,390 forward strand.

About this transcript

This transcript has 4 exons and maps to 223 oligo probes.

Gene

This transcript is a product of gene ENSG00000253138.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000729586.1	LINC00967-205	1029	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000518035.6	LINC00967-203	2767	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000729596.1	LINC00967-215	2404	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000729621.1	LINC00967-240	2034	No protein	-	lncRNA	-	-
ENST00000729607.1	LINC00967-226	1841	No protein	-	lncRNA	-	-
ENST00000729608.1	LINC00967-227	1683	No protein	-	lncRNA	-	-
ENST00000729606.1	LINC00967-225	1667	No protein	-	lncRNA	-	-
ENST00000729613.1	LINC00967-232	1522	No protein	-	lncRNA	-	-
ENST00000729618.1	LINC00967-237	1519	No protein	-	lncRNA	-	-
ENST00000729633.1	LINC00967-252	1479	No protein	-	lncRNA	-	-
ENST00000729598.1	LINC00967-217	1436	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000729593.1	LINC00967-212	1339	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000729594.1	LINC00967-213	1328	No protein	-	lncRNA	-	-
ENST00000729595.1	LINC00967-214	1312	No protein	-	lncRNA	-	-
ENST00000729628.1	LINC00967-247	1210	No protein	-	lncRNA	-	-
ENST00000729587.1	LINC00967-206	1203	No protein	-	lncRNA	-	-
ENST00000729601.1	LINC00967-220	1149	No protein	-	lncRNA	-	-
ENST00000729627.1	LINC00967-246	1146	No protein	-	lncRNA	-	-
ENST00000729588.1	LINC00967-207	1139	No protein	-	lncRNA	-	-
ENST00000729602.1	LINC00967-221	1137	No protein	-	lncRNA	-	-
ENST00000729604.1	LINC00967-223	1108	No protein	-	lncRNA	-	-
ENST00000729605.1	LINC00967-224	1097	No protein	-	lncRNA	-	-
ENST00000729590.1	LINC00967-209	1033	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000729626.1	LINC00967-245	1017	No protein	-	lncRNA	-	-
ENST00000729609.1	LINC00967-228	1003	No protein	-	lncRNA	-	-
ENST00000729592.1	LINC00967-211	997	No protein	-	lncRNA	-	-
ENST00000729619.1	LINC00967-238	990	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000729603.1	LINC00967-222	980	No protein	-	lncRNA	-	-
ENST00000729615.1	LINC00967-234	944	No protein	-	lncRNA	-	-
ENST00000729612.1	LINC00967-231	934	No protein	-	lncRNA	-	-
ENST00000729623.1	LINC00967-242	851	No protein	-	lncRNA	-	-
ENST00000729634.1	LINC00967-253	845	No protein	-	lncRNA	-	-
ENST00000729610.1	LINC00967-229	837	No protein	-	lncRNA	-	-
ENST00000729625.1	LINC00967-244	829	No protein	-	lncRNA	-	-
ENST00000729620.1	LINC00967-239	827	No protein	-	lncRNA	-	-
ENST00000729611.1	LINC00967-230	826	No protein	-	lncRNA	-	-
ENST00000729630.1	LINC00967-249	824	No protein	-	lncRNA	-	-
ENST00000729624.1	LINC00967-243	810	No protein	-	lncRNA	-	-
ENST00000729617.1	LINC00967-236	806	No protein	-	lncRNA	-	-
ENST00000729631.1	LINC00967-250	793	No protein	-	lncRNA	-	-
ENST00000517689.1	LINC00967-201	792	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000517725.2	LINC00967-202	791	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000729614.1	LINC00967-233	786	No protein	-	lncRNA	-	-
ENST00000729632.1	LINC00967-251	783	No protein	-	lncRNA	-	-
ENST00000729616.1	LINC00967-235	755	No protein	-	lncRNA	-	-
ENST00000729597.1	LINC00967-216	751	No protein	-	lncRNA	-	-
ENST00000729622.1	LINC00967-241	747	No protein	-	lncRNA	-	-
ENST00000729589.1	LINC00967-208	737	No protein	-	lncRNA	-	-
ENST00000729599.1	LINC00967-218	733	No protein	-	lncRNA	-	-
ENST00000729600.1	LINC00967-219	668	No protein	-	lncRNA	-	-
ENST00000729629.1	LINC00967-248	529	No protein	-	lncRNA	-	-
ENST00000729591.1	LINC00967-210	397	No protein	-	lncRNA	-	-
ENST00000518412.1	LINC00967-204	271	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 792 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENST00000517689.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

dotter confirmed [Definitions]

QC splicing correct

Transcript: ENST00000517689.1 LINC00967-201

Summary

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Transcript: ENST00000517689.1 LINC00967-201

Summary

About Us

Get help

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