Transcript: ENST00000515692.1

Description

novel transcript

Location

Chromosome 17: 49,887,598-49,900,893 forward strand.

About this transcript

This transcript has 5 exons and maps to 157 oligo probes.

Gene

This transcript is a product of gene ENSG00000248954.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000746153.1	-	1264	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000515692.1	-	1816	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000746154.1	-	1174	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000746173.1	-	1086	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000746170.1	-	1035	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000746162.1	-	1011	No protein	-	lncRNA	-	-
ENST00000746160.1	-	1003	No protein	-	lncRNA	-	-
ENST00000717207.1	-	930	No protein	-	lncRNA	-	-
ENST00000746163.1	-	897	No protein	-	lncRNA	-	-
ENST00000746157.1	-	856	No protein	-	lncRNA	-	-
ENST00000746175.1	-	853	No protein	-	lncRNA	-	-
ENST00000746161.1	-	773	No protein	-	lncRNA	-	-
ENST00000746167.1	-	698	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000746166.1	-	641	No protein	-	lncRNA	-	-
ENST00000746171.1	-	588	No protein	-	lncRNA	-	-
ENST00000746156.1	-	587	No protein	-	lncRNA	-	-
ENST00000746155.1	-	560	No protein	-	lncRNA	-	-
ENST00000746164.1	-	556	No protein	-	lncRNA	-	-
ENST00000746172.1	-	550	No protein	-	lncRNA	-	-
ENST00000746165.1	-	546	No protein	-	lncRNA	-	-
ENST00000746168.1	-	526	No protein	-	lncRNA	-	-
ENST00000746159.1	-	506	No protein	-	lncRNA	-	-
ENST00000746158.1	-	439	No protein	-	lncRNA	-	-
ENST00000518420.1	-	395	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000746174.1	-	355	No protein	-	lncRNA	-	-
ENST00000746169.1	-	210	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 1,816 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENST00000515692.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

dotter confirmed [Definitions]

low sequence quality

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000515692.1

Summary

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Transcript: ENST00000515692.1

Summary

About Us

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