Transcript: ENST00000513992.1 DDIT4L-203

Description

DNA damage inducible transcript 4 like [Source:HGNC Symbol;Acc:HGNC:30555]

Gene Synonyms

REDD2, RTP801L

Location

Chromosome 4: 100,187,875-100,190,782 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 4 domains and features, is associated with 1428 variant alleles and maps to 232 oligo probes.

Gene

This transcript is a product of gene ENSG00000145358.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000273990.6	DDIT4L-201	2604	193aa	ENSP00000354830.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34036	Q96D03	NM_145244.4	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000502763.1	DDIT4L-202	852	177aa	ENSP00000427301.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RJ99	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000513992.1	DDIT4L-203	553	128aa	ENSP00000427040.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RD49	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 553 bps, Translation length: 128 residues

Transcript Support Level (TSL)

TSL:4

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000513992.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000513992.1 DDIT4L-203

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Transcript: ENST00000513992.1 DDIT4L-203

Summary

About Us

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