Human (GRCh38.p14)
Description

SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:HGNC Symbol;Acc:HGNC:13565]

Gene Synonyms

TESTICAN-3

About this transcript

This transcript has 8 exons, is annotated with 18 domains and features, is associated with 224275 variant alleles and maps to 496 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000357545.9SPOCK3-2022884433aaENSP00000350153.4
 
Protein coding
CCDS34095Q9BQ16-1 NM_001040159.2MANE SelectEnsembl CanonicalGENCODE basicAPPRIS ALT2TSL:1
ENST00000421836.6SPOCK3-2033061385aaENSP00000411344.2
 
Protein coding
CCDS56344Q9BQ16-4 -GENCODE basicAPPRIS ALT2TSL:2
ENST00000357154.7SPOCK3-2012986436aaENSP00000349677.3
 
Protein coding
CCDS54817Q9BQ16-3 -GENCODE basicAPPRIS P3TSL:5
ENST00000506886.5SPOCK3-2102947436aaENSP00000420920.1
 
Protein coding
CCDS54817Q9BQ16-3 -GENCODE basicAPPRIS P3TSL:5
ENST00000511531.5SPOCK3-2182908436aaENSP00000423421.1
 
Protein coding
Q9BQ16-3 -GENCODE basicAPPRIS P3TSL:5
ENST00000504953.5SPOCK3-2072900433aaENSP00000425570.1
 
Protein coding
CCDS34095Q9BQ16-1 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000541354.5SPOCK3-2262797316aaENSP00000444789.1
 
Protein coding
CCDS56343Q9BQ16-7 -GENCODE basicTSL:2
ENST00000502330.5SPOCK3-2042180436aaENSP00000423606.1
 
Protein coding
Q9BQ16-3 -GENCODE basicAPPRIS P3TSL:1
ENST00000535728.5SPOCK3-2252007344aaENSP00000441396.2
 
Protein coding
CCDS75207A0A0A0MTJ2 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000510741.5SPOCK3-2151963393aaENSP00000426716.1
 
Protein coding
CCDS56346Q9BQ16-8 -GENCODE basicTSL:5
ENST00000511269.5SPOCK3-2171768433aaENSP00000425502.1
 
Protein coding
CCDS34095Q9BQ16-1 -GENCODE basicAPPRIS ALT2TSL:2
ENST00000512681.5SPOCK3-2221457338aaENSP00000426318.1
 
Protein coding
CCDS58931Q9BQ16-5 -GENCODE basicTSL:2
ENST00000512648.5SPOCK3-2211456313aaENSP00000426177.1
 
Protein coding
CCDS56347Q9BQ16-9 -GENCODE basicTSL:1
ENST00000510403.5SPOCK3-214563172aaENSP00000423176.1
 
Protein coding
E7ENT7 -TSL:4CDS 3' incomplete
ENST00000509854.5SPOCK3-213556161aaENSP00000423367.1
 
Protein coding
E7ENM6 -TSL:5CDS 3' incomplete
ENST00000506697.5SPOCK3-209505115aaENSP00000424168.1
 
Protein coding
E7EMP8 -TSL:5CDS 3' incomplete
ENST00000512042.1SPOCK3-220505115aaENSP00000425407.1
 
Protein coding
E7EMP8 -TSL:5CDS 3' incomplete
ENST00000502821.5SPOCK3-206174963aaENSP00000424980.1
 
Nonsense mediated decay
Q4W5S3 -TSL:2
ENST00000511905.5SPOCK3-219170079aaENSP00000425712.1
 
Nonsense mediated decay
E7EQ24 -TSL:2
ENST00000505187.5SPOCK3-208158864aaENSP00000422170.1
 
Nonsense mediated decay
E7ESN1 -TSL:2
ENST00000507370.5SPOCK3-212151071aaENSP00000424677.1
 
Nonsense mediated decay
E7EVH4 -TSL:2
ENST00000507086.5SPOCK3-2111032122aaENSP00000420928.1
 
Nonsense mediated decay
B4DG04 -TSL:5
ENST00000502741.5SPOCK3-2051032122aaENSP00000422336.1
 
Nonsense mediated decay
B4DG04 -TSL:2
ENST00000515143.5SPOCK3-22356583aaENSP00000425859.1
 
Nonsense mediated decay
H0YA19 -TSL:4CDS 5' incomplete
ENST00000511226.5SPOCK3-21656579aaENSP00000424674.1
 
Nonsense mediated decay
E7EQ24 -TSL:5
ENST00000515316.5SPOCK3-22452489aaENSP00000426995.1
 
Nonsense mediated decay
E7ENY3 -TSL:4
Statistics

Exons: 8, Coding exons: 7, Transcript length: 1,457 bps, Translation length: 338 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BQ16

CCDS

This transcript is a member of the Human CCDS set: CCDS58931

Transcript Support Level (TSL)

TSL:2

Version

ENST00000512681.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.