Human (GRCh38.p14)
Description

LIM and calponin homology domains 1 [Source:HGNC Symbol;Acc:HGNC:29191]

Gene Synonyms

DKFZP686A01247, LIMCH1A, LMO7B

Location
About this transcript

This transcript has 23 exons, is annotated with 44 domains and features, is associated with 136007 variant alleles and maps to 845 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000503057.6LIMCH1-20576971467aaENSP00000425631.1
 
Protein coding
CCDS82919G5EA03 NM_001330672.2MANE SelectEnsembl CanonicalGENCODE basicTSL:1
ENST00000313860.12LIMCH1-20161451083aaENSP00000316891.7
 
Protein coding
CCDS33977Q9UPQ0-1 -GENCODE basicAPPRIS P3TSL:1
ENST00000396595.7LIMCH1-2035740902aaENSP00000379840.3
 
Protein coding
CCDS47047Q9UPQ0-6 -GENCODE basicTSL:1
ENST00000381753.8LIMCH1-2025705890aaENSP00000371172.4
 
Protein coding
CCDS54765Q9UPQ0-9 -GENCODE basicTSL:1
ENST00000513024.5LIMCH1-2185129910aaENSP00000425222.1
 
Protein coding
CCDS75121Q9UPQ0-5 -GENCODE basicTSL:1
ENST00000512820.5LIMCH1-21650711069aaENSP00000424437.1
 
Protein coding
CCDS75119Q9UPQ0-4 -GENCODE basicTSL:1
ENST00000512946.5LIMCH1-21750571057aaENSP00000424645.1
 
Protein coding
CCDS54763Q9UPQ0-2 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000508501.5LIMCH1-20850541056aaENSP00000424825.1
 
Protein coding
CCDS54764Q9UPQ0-10 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000512632.5LIMCH1-2154792980aaENSP00000427045.1
 
Protein coding
CCDS87221D6RD46 -GENCODE basicTSL:1
ENST00000514096.5LIMCH1-2193543897aaENSP00000426334.1
 
Protein coding
E7EPK0 -GENCODE basicTSL:1
ENST00000509277.5LIMCH1-2093474916aaENSP00000422864.1
 
Protein coding
CCDS82920E9PDJ9 -GENCODE basicTSL:2
ENST00000511496.5LIMCH1-2133439897aaENSP00000421242.1
 
Protein coding
CCDS87222Q9UPQ0-8 -GENCODE basicTSL:1
ENST00000508466.1LIMCH1-2073051917aaENSP00000421656.1
 
Protein coding
H0Y8P3 -TSL:2CDS 5' incomplete
ENST00000509638.5LIMCH1-2111570153aaENSP00000427311.1
 
Protein coding
D6RJ93 -GENCODE basicTSL:1
ENST00000509454.5LIMCH1-2101506160aaENSP00000423355.1
 
Protein coding
Q6NVB9 -GENCODE basicTSL:1
ENST00000446625.6LIMCH1-204789126aaENSP00000411020.2
 
Protein coding
D6R8Y0 -TSL:5CDS 3' incomplete
ENST00000511424.5LIMCH1-21255126aaENSP00000426353.1
 
Protein coding
D6RGH8 -TSL:3CDS 3' incomplete
ENST00000515785.1LIMCH1-2211129No protein-
 
Protein coding CDS not defined
--TSL:1
ENST00000514190.5LIMCH1-220540No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000515847.1LIMCH1-222490No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000512228.5LIMCH1-214473No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000505705.1LIMCH1-206437No protein-
 
Protein coding CDS not defined
--TSL:3
Statistics

Exons: 23, Coding exons: 23, Transcript length: 4,792 bps, Translation length: 980 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS87221

Transcript Support Level (TSL)

TSL:1

Version

ENST00000512632.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.