Transcript: ENST00000512194.2 HERC3-210

Description

HECT and RLD domain containing E3 ubiquitin protein ligase 3 [Source:HGNC Symbol;Acc:HGNC:4876]

Gene Synonyms

KIAA0032

Location

About this transcript

This transcript has 26 exons, is annotated with 38 domains and features, is associated with 73770 variant alleles and maps to 848 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000512194.2	HERC3-210	4967	1042aa	ENSP00000421021.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS93559	H0Y8G9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 26, Coding exons: 23, Transcript length: 4,967 bps, Translation length: 1,042 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS93559

Transcript Support Level (TSL)

TSL:5

Version

ENST00000512194.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

inferred transcript model [Definitions]

RNA-Seq supported partial

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.