Transcript: ENST00000510523.2 GALNT7-DT-203

Description

GALNT7 divergent transcript [Source:HGNC Symbol;Acc:HGNC:55604]

Location

Chromosome 4: 173,164,345-173,168,947 reverse strand.

About this transcript

This transcript has 4 exons and maps to 290 oligo probes.

Gene

This transcript is a product of gene ENSG00000245213.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000724821.1	GALNT7-DT-210	882	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000661589.1	GALNT7-DT-207	2617	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000499322.7	GALNT7-DT-201	2585	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000510523.2	GALNT7-DT-203	2337	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000500914.6	GALNT7-DT-202	2036	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000724830.1	GALNT7-DT-219	1578	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000724826.1	GALNT7-DT-215	1576	No protein	-	lncRNA	-	-
ENST00000724832.1	GALNT7-DT-221	1422	No protein	-	lncRNA	-	-
ENST00000724835.1	GALNT7-DT-224	1380	No protein	-	lncRNA	-	-
ENST00000663396.1	GALNT7-DT-208	1360	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000656803.1	GALNT7-DT-204	1304	No protein	-	lncRNA	-	-
ENST00000724833.1	GALNT7-DT-222	1256	No protein	-	lncRNA	-	-
ENST00000724831.1	GALNT7-DT-220	1190	No protein	-	lncRNA	-	-
ENST00000666327.1	GALNT7-DT-209	1147	No protein	-	lncRNA	-	-
ENST00000659700.1	GALNT7-DT-205	1079	No protein	-	lncRNA	-	-
ENST00000724827.1	GALNT7-DT-216	908	No protein	-	lncRNA	-	-
ENST00000724823.1	GALNT7-DT-212	906	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000724834.1	GALNT7-DT-223	893	No protein	-	lncRNA	-	-
ENST00000724825.1	GALNT7-DT-214	865	No protein	-	lncRNA	-	-
ENST00000724822.1	GALNT7-DT-211	853	No protein	-	lncRNA	-	-
ENST00000724824.1	GALNT7-DT-213	845	No protein	-	lncRNA	-	-
ENST00000660750.1	GALNT7-DT-206	774	No protein	-	lncRNA	-	-
ENST00000724828.1	GALNT7-DT-217	757	No protein	-	lncRNA	-	-
ENST00000724829.1	GALNT7-DT-218	624	No protein	-	lncRNA	-	-
ENST00000724836.1	GALNT7-DT-225	616	No protein	-	lncRNA	-	-
ENST00000724837.1	GALNT7-DT-226	505	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 2,337 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000510523.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000510523.2 GALNT7-DT-203

Summary

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Transcript: ENST00000510523.2 GALNT7-DT-203

Summary

About Us

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