Transcript: ENST00000510095.5

Description

novel transcript

Location

Chromosome 4: 11,625,714-11,813,958 forward strand.

About this transcript

This transcript has 4 exons, is associated with 95816 variant alleles and maps to 178 oligo probes.

Gene

This transcript is a product of gene ENSG00000249631.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000510095.5	-	555	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000670997.2	-	1610	No protein	-	lncRNA	-	-
ENST00000669014.1	-	1473	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000774366.1	-	1344	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000693439.1	-	1308	No protein	-	lncRNA	-	-
ENST00000668579.1	-	1270	No protein	-	lncRNA	-	-
ENST00000671103.1	-	1260	No protein	-	lncRNA	-	-
ENST00000658637.1	-	1254	No protein	-	lncRNA	-	-
ENST00000670288.1	-	1215	No protein	-	lncRNA	-	-
ENST00000774380.1	-	1182	No protein	-	lncRNA	-	-
ENST00000823073.1	-	1132	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000668521.1	-	1106	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000668630.1	-	1084	No protein	-	lncRNA	-	-
ENST00000662348.1	-	1073	No protein	-	lncRNA	-	-
ENST00000823074.1	-	1036	No protein	-	lncRNA	-	-
ENST00000658506.1	-	1011	No protein	-	lncRNA	-	-
ENST00000656929.1	-	1005	No protein	-	lncRNA	-	-
ENST00000670126.1	-	984	No protein	-	lncRNA	-	-
ENST00000656636.1	-	981	No protein	-	lncRNA	-	-
ENST00000663860.1	-	971	No protein	-	lncRNA	-	-
ENST00000654289.1	-	970	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000653229.1	-	969	No protein	-	lncRNA	-	-
ENST00000663535.1	-	964	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000661777.1	-	962	No protein	-	lncRNA	-	-
ENST00000653495.2	-	954	No protein	-	lncRNA	-	-
ENST00000653019.2	-	941	No protein	-	lncRNA	-	-
ENST00000664952.1	-	934	No protein	-	lncRNA	-	-
ENST00000669564.1	-	933	No protein	-	lncRNA	-	-
ENST00000669764.1	-	930	No protein	-	lncRNA	-	-
ENST00000774374.1	-	891	No protein	-	lncRNA	-	-
ENST00000774373.1	-	889	No protein	-	lncRNA	-	-
ENST00000658916.1	-	871	No protein	-	lncRNA	-	-
ENST00000774386.1	-	857	No protein	-	lncRNA	-	-
ENST00000774377.1	-	843	No protein	-	lncRNA	-	-
ENST00000665315.1	-	841	No protein	-	lncRNA	-	-
ENST00000666239.2	-	831	No protein	-	lncRNA	-	-
ENST00000667170.1	-	828	No protein	-	lncRNA	-	-
ENST00000667921.2	-	826	No protein	-	lncRNA	-	-
ENST00000654143.1	-	824	No protein	-	lncRNA	-	-
ENST00000774372.1	-	818	No protein	-	lncRNA	-	-
ENST00000774379.1	-	794	No protein	-	lncRNA	-	-
ENST00000663239.1	-	782	No protein	-	lncRNA	-	-
ENST00000509244.3	-	781	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000658796.1	-	774	No protein	-	lncRNA	-	-
ENST00000774387.1	-	738	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000774369.1	-	713	No protein	-	lncRNA	-	-
ENST00000774381.1	-	696	No protein	-	lncRNA	-	-
ENST00000774367.1	-	695	No protein	-	lncRNA	-	-
ENST00000515286.5	-	688	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000774384.1	-	686	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000656855.1	-	680	No protein	-	lncRNA	-	-
ENST00000774388.1	-	679	No protein	-	lncRNA	-	-
ENST00000666219.1	-	678	No protein	-	lncRNA	-	-
ENST00000774391.1	-	628	No protein	-	lncRNA	-	-
ENST00000774378.1	-	596	No protein	-	lncRNA	-	-
ENST00000774382.1	-	595	No protein	-	lncRNA	-	-
ENST00000508998.5	-	593	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000661922.2	-	588	No protein	-	lncRNA	-	-
ENST00000774385.1	-	571	No protein	-	lncRNA	-	-
ENST00000656429.1	-	569	No protein	-	lncRNA	-	-
ENST00000774390.1	-	544	No protein	-	lncRNA	-	-
ENST00000774389.1	-	529	No protein	-	lncRNA	-	-
ENST00000774368.1	-	514	No protein	-	lncRNA	-	-
ENST00000774370.1	-	506	No protein	-	lncRNA	-	-
ENST00000655077.1	-	504	No protein	-	lncRNA	-	-
ENST00000774383.1	-	483	No protein	-	lncRNA	-	-
ENST00000659726.1	-	453	No protein	-	lncRNA	-	-
ENST00000774371.1	-	453	No protein	-	lncRNA	-	-
ENST00000774375.1	-	453	No protein	-	lncRNA	-	-
ENST00000510639.1	-	427	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000774376.1	-	421	No protein	-	lncRNA	-	-
ENST00000514452.1	-	387	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 555 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000510095.5

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENST00000510095.5

Summary

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Transcript: ENST00000510095.5

Summary

About Us

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